Table 3.
Gene sets enriched in phenotype high.
MSigDB collection | Gene set name | NES | NOM p-val | FDR q-val |
---|---|---|---|---|
c2.cp.kegg.v7.1.symbols.gmt | CELL_CYCLE | 2.543 | 0.000 | 0.000 |
CHEMOKINE_SIGNALING_PATHWAY | 2.067 | 0.006 | 0.008 | |
CYTOSOLIC_DNA_SENSING_PATHWAY | 2.197 | 0.000 | 0.002 | |
JAK_STAT_SIGNALING_PATHWAY | 2.126 | 0.000 | 0.005 | |
NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY | 2.206 | 0.000 | 0.002 | |
P53_SIGNALING_PATHWAY | 2.378 | 0.000 | 0.001 | |
TOLL_LIKE_RECEPTOR_SIGNALING_PATHWAY | 2.299 | 0.000 | 0.001 |