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. 2021 Jun 15;22:325. doi: 10.1186/s12859-021-04245-x

Table 1.

Average test accuracy scores for Mask-RCNN trained on Kaggle dataset and tested on super-resolution imagery

Test set Pre-processing F1-Score FN Hausdorff
Colon tissue 512 × 512 0.181 0.819 14.07
256 × 256 0.268 0.619 8.68
256 × 256 Blur 0.262 0.635 8.03
256 × 256 HEq 0.352 0.501 8.22
Cell line 512 × 512 0.073 0.924 12.83
256 × 256 0.475 0.473 6.9
256 × 256 Blur 0.555 0.268 5.92
256 × 256 HEq 0.628 0.201 6.07

Average F1-Score, false negative percent (FN) and Hausdorff distance for a Mask R-CNN segmentation network model trained on the Kaggle dataset, and applied to both our super-resolution colon tissue and DNA labelled cell line datasets. The network was applied to our Colon Tissue and Cell Line image test sets (512 × 512 resolution), as well as to the downsized versions of each test set (256 × 256 resolution), and to Gaussian blurred (Blur) and histogram equalized (HEq) versions