Table 1.
Test set | Pre-processing | F1-Score | FN | Hausdorff |
---|---|---|---|---|
Colon tissue | 512 × 512 | 0.181 | 0.819 | 14.07 |
256 × 256 | 0.268 | 0.619 | 8.68 | |
256 × 256 Blur | 0.262 | 0.635 | 8.03 | |
256 × 256 HEq | 0.352 | 0.501 | 8.22 | |
Cell line | 512 × 512 | 0.073 | 0.924 | 12.83 |
256 × 256 | 0.475 | 0.473 | 6.9 | |
256 × 256 Blur | 0.555 | 0.268 | 5.92 | |
256 × 256 HEq | 0.628 | 0.201 | 6.07 |
Average F1-Score, false negative percent (FN) and Hausdorff distance for a Mask R-CNN segmentation network model trained on the Kaggle dataset, and applied to both our super-resolution colon tissue and DNA labelled cell line datasets. The network was applied to our Colon Tissue and Cell Line image test sets (512 × 512 resolution), as well as to the downsized versions of each test set (256 × 256 resolution), and to Gaussian blurred (Blur) and histogram equalized (HEq) versions