Synchronization within and between sites. A, Synchronization between individual neurons can happen intermittently in bursts of variable lengths within one site. Large-scale local synchronization is reflected as oscillation in the local field potential (LFP). B, I will refer to synchronization between sites as phase coupling. Measures of phase coupling can be obtained by recording LFP activity (or EEG/MEG activity) in two anatomically separate sites and by testing whether the phase of the two oscillatory signals is consistently aligned. In this example, the subcortical sites are driven by cortical activity, with the phases being systematically offset, reflecting conduction delays. Only the green cells representing selected ensembles are synchronized and coupled; the gray cells are not recruited to join the oscillating activity. Directed coherence, Granger causality or dynamic causal modeling (DCM) can be used to make inferences about the directionality of coupling, asking what region is the driver. However, it is important to keep in mind that two recorded sites can be phase-coupled also as a result of being driven by a third site that may have not been recorded (Buzsáki and Schomburg, 2015). Note that phase coupling can but does not need to be accompanied by amplitude coupling. In the example shown in B, the amplitude in subcortical sites increased as the cortical amplitude increased. However, in sites that show strong oscillatory activity at baseline, the EEG/MEG amplitude may decrease when a subset of cells becomes coupled with another site.