TABLE 2.
Sample duplicate 1 | Sample duplicate 2 | ||||
Linear regression analysis | R2 | p value | R2 | p value | |
lm(C ∼ T*S) | Individual 1 | 0.922 | <2.2E–16*** | 0.865 | <2.2E–16*** |
Individual 2 | 0.952 | 0.948 | |||
Individual 3 | 0.940 | 0.907 | |||
Individual 4 | 0.955 | 0.966 | |||
Individual 5 | 0.964 | 0.979 | |||
Individual 6 | 0.968 | 0.962 | |||
Individual 7 | 0.973 | 0.966 | |||
Individual 8 | 0.874 | 0.908 | |||
Individual 9 | 0.965 | 0.946 | |||
Individual 10 | 0.953 | 0.950 | |||
Individual 11 | 0.912 | 0.927 | |||
Individual 12 | 0.936 | 0.946 | |||
Individual 13 | 0.968 | 0.937 | |||
Individual 14 | 0.959 | 0.905 | |||
Individual 15 | 0.968 | 0.902 | |||
lm(C ∼ T*I) | F. periodonticum | 0.941 | 0.889 | ||
H. parainfluenzae | 0.964 | 0.920 | |||
V. dispar | 0.959 | 0.906 | |||
V. parvula | 0.969 | 0.948 | |||
lm(C ∼ T*I + T*S) | Overall | 0.546 | 0.551 |
lm(C ∼ T*S): time-dependency of the four selected bacterial species altogether in each individual, lm(C ∼ T*I): time-dependency of each selected bacterial species considering the 15 individuals altogether, and lm(C ∼ T*I + T*S): time-dependency of the four selected bacterial species and 15 individuals altogether. R2 values indicate the variation explained by the time since stain deposition in the qPCR-derived bacterial cell counts. Asterisks indicate the significance level of the Benjamini-Hochberg corrected p values as follows: 0.001 “***”, 0.01 “**”, and 0.05 “*”.