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Pairwise comparisons of the -log10 p-values for the multi-encoding GWAS of (A) T2D and (B) AMD. For each SNP, we plotted the -log10 p-values for pairwise combination of encodings in six scatterplots for (A) T2D and (B) AMD compared to the identity line (1:1 line) such that pairs of encodings having p-values that fall closer to the line are more concordant.
