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. 2020 Nov 27;7(2):000481. doi: 10.1099/mgen.0.000481

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© 2021 The Authors

This is an open-access article distributed under the terms of the Creative Commons Attribution NonCommercial License.

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Fig. 1. — Comparison of WGS-based genogroups, defined at two levels, and both traditional typing methods for N. gonorrhoeae . The MSTs enrol all 3791 N . gonorrhoeae isolates based on the MScgMLST scheme (822 loci). Nodes, corresponding to a unique allelic profile, are coloured according to their corresponding (a) high-level WGS-based genogroup, (b) low-level WGS-based genogroup, (c) ST of the traditional seven loci MLST scheme and (d) ST of the two loci NG-MAST scheme. Numbers in parenthesis refer to the number of isolates comprising each genogroup or ST. The MSTs were generated using GrapeTree v1.5.0 software [56].