Table 6.
Type of PCR | Target gene | Sequence | Amplicon size (bp) | Note | Reference |
---|---|---|---|---|---|
Nested | 18S rRNA (Encephalitozoon spp., E. bieneusi) | 1st: PMicF: 5′- GGTTGATTCTGCCTGACG -3′; PMicR: 5′ − CTTGCGAGC(G/A)TACTATCC -3′ | 779 | Positive samples sequenced. | Javanmard et al. (2018) |
2nd: EnbF: 5′- GGTAATTTGGTCTCTGTGTG -3′; EnbR: 5′- CTACACTCCCTATCCGTTC -3′ | 440 | ||||
EncepF: 5′- AGTACGATGATTTGDTTG-3′; EncepR: 5′- ACATAAGTCCAAGARCACA -3′ | 530 | ||||
conventional | ITS (E. bieneusi) | AL4038: 5′-AGGGATGAAGAGCTTCGGCTCTG-3′; AL4040: 5′-AATATCCCTAATACAGGATCACT-3′ | 392 | Positive samples sequenced. | Li et al. (2019) |
conventional | nad2 (Toxocara spp.) | F: 5′-GGAGTTGTTTAAGTTGGATGG-3′; R: 5′ -AGAACTCCGCCTTATCAAGACGAC-3´ | 227 | Guggisberg et al. (2020) |