Table 1.

Summary of Hi-C data used in this work

Cell line	Raw/Valid pairs (M)	Amp/Del/Trans/DMs
A549	251.9/133.1	1/2/4/0
CAKI2	323.7/158.0	2/5/20/0
G401	340.9/140.4	0/4/2/0
LNCaP	306.5/90.6	0/5/4/0
NCIH460	313.2/143.9	29/2/12/1
PANC1	289.0/152.4	5/5/18/1
RPMI7951	335.9/178.4	21/2/2/0
SKMEL5	303.5/75.5	13/9/7/0
SKNMC	313.8/146/6	2/8/5/0
T47D	247.7/132.6	32/2/16/0
IMR90	529.1/113.1	0/0/0/0
hESC	237.6/43.6	0/1/0/0

Note: The number of reads, valid pairs (in millions); amplifications (Amp), deletion (Del), translocations (Trans) and double minutes (DMs) are given.