Table 1. Chloroplast genome characteristics of Stemona sessilifolia, Asparagus officinalis and Carludovica palmata.
Plastome | Characteristics | Species | ||
---|---|---|---|---|
Stemona sessilifolia | Asparagus officinalis | Carludovica palmata | ||
Size (bp) | Genome | 154037 | 156699 | 158545 |
LSC | 81949 | 84999 | 71426 | |
IR | 27090 | 26531 | 26529 | |
SSC | 17908 | 18638 | 18364 | |
tRNA genes | 2877 | 2863 | 2816 | |
rRNA genes | 9060 | 9052 | 8866 | |
CDS | 79260 | 77436 | 77802 | |
GC content (%) | Overall | 38.00 | 37.59 | 37.74 |
LSC | 36.18 | 35.60 | 35.79 | |
IR | 42.70 | 42.92 | 42.81 | |
SSC | 32.13 | 31.50 | 31.51 | |
tRNA genes | 53.43 | 53.57 | 53.40 | |
rRNA genes | 55.22 | 55.38 | 55.38 | |
CDS | 38.29 | 38.1 | 38.41 | |
1st position | 45.7 | 45.64 | 45.93 | |
2nd position | 38.46 | 38.56 | 38.39 | |
3rd position | 30.72 | 30.09 | 30.91 | |
NO. of genes | Total | 112 | 110 | 112 |
protein-coding genes | 80 | 78 | 80 | |
tRNAs | 28 | 28 | 28 | |
rRNAs | 4 | 4 | 4 | |
Genes with introns | 18 | 18 | 18 | |
Genes in IR | 21 | 22 | 19 |
LSC: large single-copy, IR: inverted repeat, SSC: small single-copy, CDS: coding sequence.