Skip to main content
. 2021 Jun 18;11:12903. doi: 10.1038/s41598-021-92303-y

Figure 3.

Figure 3

Col4a1/a2 is required to maintain VSMCs in the contractile phenotype. (a) Number of proteins identified in unchallenged aortas and proximal halves of AAA lesions, and the number of regulated proteins (uncorrected p ≤ 0.05) by the Col4a1/a2+/− genotype for each condition. For unchallenged aortas, we analyzed 40 samples (aortas from 10 female Col4a1/a2+/+ mice, 12 female Col4a1/a2+/− mice, 9 male Col4a1/a2+/+ mice, and 9 male Col4a1/a2+/− mice) mixing sexes to increase statistical power. For AAA lesions, we analyzed 28 samples (AAA from 13 male Col4a1/a2+/+ mice and 15 male Col4a1/a2+/− mice). (b) Significantly regulated proteins in unchallenged aortas after correction for multiple testing (fdr ≤ 0.05). No proteins remained significantly regulated for AAA lesions after correction for multiple testing. (c) Significantly enriched GO terms among the 94 downregulated proteins (uncorrected p ≤ 0.05, excluding Col4a1/a2) in unchallenged Col4a1/a2+/− aortas. No GO terms were significantly regulated for upregulated proteins (uncorrected p ≤ 0.05) in unchallenged aortas, or up- or down-regulated proteins (uncorrected p ≤ 0.05, excluding Col4a1/a2) in AAA lesions. (d) Volcano plot showing protein level changes in unchallenged Col4a1/a2+/− aortas relative to Col4a1/a2+/+ aortas. Col4a1/a2 (red), VSMC markers29 (magenta), BM proteins (yellow), and non-BM collagens (grey) are magnified for clarity. Identities of regulated (uncorrected p ≤ 0.05) VSMC markers and BM proteins are shown in the parallel shifted rectangle. (e) Volcano plot showing protein level changes in Col4a1/a2+/− AAA lesions relative to Col4a1/a2+/+ lesions. The color code of magnified dots is the same as in (d). For (d, e), the red horizontal lines show the corrected (fdr = 0.05) and uncorrected (p = 0.05) level of significance, respectively. Data in (b) and (d, e) were analyzed by unpaired t-test for each protein followed by fdr correction for multiple testing.