Table 5.
SNP | Model | Genotype | Control | Case | OR (95% CI) | p |
---|---|---|---|---|---|---|
rs13098637 | Dominant | T/T | 430 (71.7%) | 387 (64.5%) | 1 | 0.007* |
T/C-C/C | 170 (28.3%) | 213 (35.5%) | 1.40 (1.09–1.78) | |||
Recessive | T/T-T/C | 587 (97.8%) | 576 (96%) | 1 | 0.068 | |
C/C | 13 (2.2%) | 24 (4%) | 1.87 (0.94–3.70) | |||
Log-additive | — | — | — | 1.37 (1.11–1.70) | 0.004* | |
rs3976523 | Dominant | A/A | 269 (44.8%) | 243 (40.5%) | 1 | 0.130 |
A/C-C/C | 331 (55.2%) | 357 (59.5%) | 1.19 (0.95–1.50) | |||
Recessive | A/A-A/C | 537 (89.5%) | 528 (88%) | 1 | 0.410 | |
C/C | 63 (10.5%) | 72 (12%) | 1.16 (0.81–1.67) | |||
Log-additive | — | — | — | 1.14 (0.96–1.35) | 0.130 | |
rs4240897 | Dominant | G/G | 257 (42.8%) | 321 (53.5%) | 1 | <0.001* |
G/A-A/A | 343 (57.2%) | 279 (46.5%) | 0.65 (0.52–0.82) | |||
Recessive | G/G-G/A | 530 (88.3%) | 563 (93.8%) | 1 | <0.001* | |
A/A | 70 (11.7%) | 37 (6.2%) | 0.49 (0.32–0.75) | |||
Log-additive | — | — | — | 0.67 (0.56–0.80) | <0.001* | |
rs2236058 | Dominant | C/C | 138 (23%) | 179 (29.8%) | 1 | 0.008* |
C/G-G/G | 462 (77%) | 421 (70.2%) | 0.71 (0.54–0.91) | |||
Recessive | C/C-C/G | 427 (71.2%) | 485 (80.8%) | 1 | <0.001* | |
G/G | 173 (28.8%) | 115 (19.2%) | 0.59 (0.45–0.77) | |||
Log-additive | — | — | — | 0.72 (0.61–0.85) | <0.001* | |
rs879255685 | Dominant | G/G | 393 (65.5%) | 386 (64.3%) | 1 | 0.680 |
G/A-A/A | 207 (34.5%) | 214 (35.7%) | 1.05 (0.83–1.33) | |||
Recessive | G/G-G/A | 586 (97.7%) | 574 (95.7%) | 1 | 0.048* | |
A/A | 14 (2.3%) | 26 (4.3%) | 1.92 (0.99–3.72) | |||
Log-additive | — | — | — | 1.11 (0.90–1.36) | 0.320 | |
rs879255689 | Dominant | G/G | 421 (70.2%) | 381 (63.5%) | 1 | 0.014* |
G/A-A/A | 179 (29.8%) | 219 (36.5%) | 1.35 (1.06–1.72) | |||
Recessive | G/G-G/A | 588 (98%) | 575 (95.8%) | 1 | 0.028* | |
A/A | 12 (2%) | 25 (4.2%) | 2.14 (1.06–4.30) | |||
Log-additive | — | — | — | 1.36 (1.10–1.68) | 0.005* |
Note: *p < 0.05 indicates statistical significance.
Abbreviations: SNP, single nucleotide polymorphism; OR, odds ratio; CI, confidence interval.