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MultiGWAS flowchart has three steps: adjustment, multi‐analysis, and integration. In the first step, after the input data management upload, MultiGWAS read the configuration file and preprocess the input data (genotype and phenotype dataset). The second step is the GWAS analysis, where MultiGWAS configures and runs the four packages in parallel. Finally, in the third step, MultiGWAS summarizes the results and generates a report using different tabular and graphical visualizations
