Table 3.
MetamORF most important statistics
| Feature | H. sapiens | M. musculus | |
|---|---|---|---|
| Original data sources | ORFs | 1 344 978 | 1 249 176 |
| Transcripts | 101 597 | 85 653 | |
| Predicted ORFs for which the transcript is unknown | 181 122 | 213 301 | |
| ORFs detected by Ribo-seq for which the transcript is unknown | 79 422 | 8546 | |
| ORFs detected by MS for which the transcript is unknown | 54 | 0 | |
| ORF to transcript associations | 3 379 219 | 2 066 627 | |
| ORFs predicted | 202 309 | 222 705 | |
| ORFs identified by ribosome profiling | 1 142 669 | 1 026 471 | |
| ORFs identified by MS | 166 | 0 | |
| ORFs for which the homogeneization of genomic coordinates failed | 709 | 0 | |
| MetamORF database | ORFs | 664 771 | 497 904 |
| Transcripts | 90 406 | 63 147 | |
| Predicted ORFs for which the transcript is unknown | 13 440 | 14 327 | |
| ORFs detected by Ribo-seq for which the transcript is unknown | 71 158 | 2 | |
| ORFs detected by MS for which the transcript is unknown | 48 | 0 | |
| ORF for which the transcripts are unknown | 83 403 | 14 329 | |
| ORF to transcript associations | 729 793 | 696 785 | |
| ORFs predicted | 17 027 | 14 500 | |
| ORFs identified by ribosome profiling | 664 771 | 497 904 | |
| ORFs identified by MS | 147 | 0 | |
| Genes harboring at least 1 sORF | 23 767 | 15 869 | |
| ORFs having at least one class annotation (short, upstream) | 630 953 | 497 904 | |
MS: mass spectrometry.