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. 2021 Jun 9;12:673512. doi: 10.3389/fmicb.2021.673512

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Copyright © 2021 Kui, Chen, Chen, Sharifi, Dong, Zhang and Miao.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Core genera involved in plant growth-promoting rhizobacteria (PGPR) or plant pathogens in cropland planting (n = 52) and understory planting (n = 70) patterns across different sites based on metagenomic data. Detailed relative abundances of core rhizosphere microbiomes involved in (A) nitrogen cycle, (B) plant growth regulator, (C) biological control agent, and (D) plant pathogens. Asterisk indicates a significant difference with P < 0.05 (MW test). Green indicates the relative abundances of core rhizosphere microbiomes is significantly higher in understory planting than in cropland planting. Black indicates the relative abundances of core rhizosphere microbiomes is significantly lower in understory planting than in cropland planting. WSDT, rhizosphere soil of cropland planting in Wenshan City; WSLX, rhizosphere soil of understory planting in Wenshan City; BSDT, rhizosphere soil of cropland planting in Baise City; BSLX, rhizosphere soil of understory planting in Baise City.