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. 2021 Jun 10;16:155–161. doi: 10.1016/j.ijpddr.2021.06.001

Table 1.

Frequencies of k13 validated mutations across Africa from 2012 to date.

Year Study country Reference Assay N PfK13 mutations frequency % [n]
F446I M476Ia Y493Ha R539Ta I543Ta P553L R561Ha P574L C580Ya A675V
2019 Angola Dimbu et al., 2021 Sanger 103
2014 Benin Ogouyèmi-Hounto et al., 2016 Sanger 78
2012–2016 Botswana Tawe et al., 2018 Sanger 127
2014–2017 Cameroon Moukoko et al. 2019 Sanger 175
2017–2019 Central African Republic Nzoumbou-Boko et al., 2020 Sanger 187
2015–2016 Congo Mayengue et al., 2018 Sanger 127
2017 Democratic Republic of Congo Yobi et al., 2020 Sanger 717
2013–2014 Equatorial Guinea Li et al., 2016 Sanger 98
2014–2017 Eritrea Pacheco et al., 2019 Amp-Seq 117
2014 Ethiopia Lo et al., 2017 Sanger 226
2017–2018 Gabon Adegbite et al., 2019 Sanger 100
2012–2014 Gambia Amambua-Ngwa et al., 2017 Taq-man/Sanger 184
2014–2017 Ghana Mensah et al. 2020 MIPs 619 0.2 [1]
2007–2016 Ghana Matrevi et al. (2019) Sanger 854 0.1 [1] 0.1 [1] 0.1 [1]
2017–2018 Ghana Aninagyei et al. (2020) WGS 84 3.6 [3]
2016 Guinea Beavogui et al., 2020 ND 411
2016 Guinea-Bissau Nag et al., 2019 Amp-seq 97
2014–2019 Kenya Omedo et al.,. Unpublished data Amp-Seq 284
2014–2017 Liberia Pacheco et al., 2019 Amp-Seq 21
2015–2016 Mali Kone et al., 2020 WGS 216
2015–2017 Mozambique Gupta et al., 2020 Sanger 206
2013 Niger Laminou et al. 2017 Sanger 366
2014–2017 Nigeria Pacheco et al., 2019 Amp-Seq 29 3.4 [1]
2013–2015 Rwanda Uwimana et al. (2020) Sanger 466 4.1 [19] 0.2 [1]
2014–2015 Rwanda Tacoli et al. 2016 Sanger 147 0.7 [1] 0.7 [1] 0.7 [1]
2015–2019 Senegal Delandre et al. 2020 Sanger 327
2016–2017 Somalia Warsame et al. 2019 Sanger 138
2018 South Africa Raman et al. 2019 Sanger 532
2015–2017 Sudan Hussien et al., 2020 Amp-Seq 176
2019 Tanzania Bwire et al. (2020) Amp-Seq 422 0.2 [1]
2017 Tanzania Moser et al. (2020) MIPs 764 0.3 [2]
2012–2013 Togo Dorkenoo et al. 2016 Sanger 500
2012–2016 Uganda Conrad et al. 2019 Sanger 716 0.1 [1] 0.1 [1]
2016–2017 Uganda Asua et al. 2020 ND 412 1.7 [7]
2014–2016 Uganda Ikeda et al., 2020 ND 194 0.5 [1]
2018–2019 Uganda Asua et al. (2020) MIPs 796 0.1 [1] 5.5 [44]
2017 Zambia Sitali et al. 2020 Sanger 70
a

Represents validated SE Asian artemisinin resistance mutations. N is the number of samples that were successfully genotyped per study. n is the number of samples harbouring the respective mutation. ND = could not be determined. Assay represents the genotyping assay used in the respective study i.e. Sanger - Sanger sequencing, MIP - molecular inversion probes, WGS - whole-genome sequencing, Amp-Seq - amplicon sequencing. DR Congo stands for the Democratic Republic of Congo.