Table 4.

Scale factor calculations and mapping statistics for H3K4me2 in wild type (wt) and Setd1a^Del/+ (Del) RAW264.7 cells after LPS (L) or LPS plus Dexamethasone (L+D) treatment

Sample ID	Geno	treat	#Reads	%map mm10	%map dm6	RQC mm10	%Dupl. mm10	RQC dm6	%Dupl. dm6	RiP mm10	IPeff mm10	RiP dm6	IPeff dm6	Abs. Sf	Rel. Sf
GSM4096676	Wt	LPS	150594152	98.0	1.1	55647040	62.3	750324	53.1	9015482	0.16	217412	0.29	10.94	1.000
GSM4096677	Wt	L+D	273648766	98.3	1.5	132706914	51.1	1979352	52.3	41604331	0.31	610549	0.31	2.37	0.216
GSM4096678	Wt	L+D	178799812	98.3	2.0	106874214	39.2	2281740	41.6	31827833	0.30	552688	0.24	3.08	0.281
GSM4096679	Del	LPS	203958426	98.3	2.4	156348392	22.1	3315942	30.8	19587761	0.13	629492	0.19	5.00	0.457
GSM4096680	Del	LPS	210208094	98.2	1.7	75365880	63.5	1758958	52.2	18737752	0.25	482824	0.27	5.22	0.477
GSM4096681	Del	L+D	243718250	98.3	1.7	69405402	71.0	1826934	55.8	23061949	0.33	509125	0.28	4.22	0.386
GSM4096683	Wt	L+D	114420802	95.8	3.2	46958500	57.2	1949396	46.6	12314423	0.26	550129	0.28	7.80	0.712
GSM4096684	Wt	LPS	113331148	96.7	2.6	45138652	59.5	1388290	53.2	13706729	0.30	469364	0.34	7.08	0.647
GSM4096685	Del	L+D	77635734	96.4	3.6	36757906	50.9	1207134	56.8	12829586	0.35	539918	0.45	7.55	0.690
GSM4096686	Del	LPS	143159666	94.8	3.2	64833572	52.3	2469554	45.9	23516324	0.36	1077635	0.44	4.10	0.374

treat – treatment; geno – genotype, Dupl. - duplicates