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. 2021 Jun 23;21:723. doi: 10.1186/s12885-021-08456-6

Table 4.

Gene enrichment analysis based on high and low TYROBP expression phenotype

Gene set name NES P.adjust FDR
high expression
 GO_NEUTROPHIL_CHEMOTAXIS 1.546 0.003 0.002
 GO_MACROPHAGE_ACTIVATION 1.547 0.003 0.002
 GO_REGULATION_OF_DENDRITIC_CELL_DIFFERENTIATION 1.595 0.012 0.009
 GO_REGULATION_OF_MONONUCLEAR_CELL_MIGRATION 1.542 0.003 0.002
 GO_POSITIVE_REGULATION_OF_LEUKOCYTE_PROLIFERATION 1.507 0.003 0.002
 KEGG_CHEMOKINE_SIGNALING_PATHWAY 1.394 0.004 0.004
 KEGG_JAK_STAT_SIGNALING_PATHWAY 1.328 0.007 0.006
 KEGG_NOD_LIKE_RECEPTOR_SIGNALING_PATHWAY 1.369 0.038 0.033
 KEGG_NATURAL_KILLER_CELL_MEDIATED_CYTOTOXICITY 1.435 0.004 0.004
 KEGG_T_CELL_RECEPTOR_SIGNALING_PATHWAY 1.442 0.004 0.004
low expression
 GO_GAMMA_AMINOBUTYRIC_ACID_SIGNALING_PATHWAY −1.546 0.013 0.011
 GO_NEUROTRANSMITTER_TRANSPORT −1.611 0.004 0.004
 GO_REGULATION_OF_NEURONAL_SYNAPTIC_PLASTICITY −1.688 0.004 0.004
 GO_GABA_GATED_CHLORIDE_ION_CHANNEL_ACTIVITY −1.735 0.004 0.004
 GO_VOLTAGE_GATED_CATION_CHANNEL_ACTIVITY −1.698 0.004 0.004
 KEGG_CALCIUM_SIGNALING_PATHWAY −1.509 0.009 0.009
 KEGG_NEUROACTIVE_LIGAND_RECEPTOR_INTERACTION −1.644 0.009 0.009

NES: normalized enrichment score; P.adjust: adjust P value; FDR: false discovery rate

Gene sets with adjust p-value < 0.05 and FDR q-value < 0.05 are considered as significant