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. 2021 Jun 8;12:653873. doi: 10.3389/fmicb.2021.653873

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Copyright © 2021 He, Gao, Wen, Ke, Ou, Li, He and Chen.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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(A) Phylogenetic tree constructed based on PCR-screened nucleotide sequences (651 bp) of TTV from urban rats and house shrews (MrBayes, GTR + G + I nucleotide substitution model). A total of 48 representative sequences of different genera within family Anelloviridae are included for comparison (ORF1 region). Percentages of the posterior probability (PP) values are indicated. This tree is rooted using the model and not by the reference to an outgroup. (B) Phylogenetic tree constructed based on near full-length nucleotide sequences (2190 bp) of TTV from urban rats and house shrews (MrBayes, GTR + G + I nucleotide substitution model). A total of 56 representative sequences of different genera within family Anelloviridae are included for comparison. Percentages of the posterior probability (PP) values are indicated. This tree is rooted using the model and not by the reference to an outgroup.