TABLE 2.
Detection of the viral sequences in animals.
|
Bats |
Rats |
Shrews |
|||||||||||||
| Hipposideros larvatus | Rhinolophus affinis | Rhinolophus pusillus | Scotophilus kuhlii | Pipistrellus abramus | Cynopterus sphinx | Subtotal | Rattus norvegicus | Rattus tanezumi | Rattus losea | Bandicota indica | Subtotal | Suncus murinus | Total | ||
| Hepatovirus | Liver tissue sample | 3.85 (2/52) | 0 (0/1) | 0 (0/1) | 0 (0/121) | 0 (0/6) | 0 (0/21) | 0.99 (2/202) | 0 (0/461) | 0 (0/64) | 0 (0/98) | 0 (0/1) | 0 (0/624) | 0 (0/177) | 0.20 (2/1003) |
| Serum sample | – | – | – | – | – | – | – | 0 (0/170) | 0 (0/20) | 0 (0/38) | – | 0 (0/228) | 0 (0/19) | 0 (0/247) | |
| Hepacivirus | Liver tissue sample | 0 (0/52) | 0 (0/1) | 0 (0/1) | 0 (0/121) | 0 (0/6) | 0 (0/21) | 0 (0/202) | 0 (0/461) | 0 (0/64) | 0 (0/98) | 0 (0/1) | 0 (0/624) | 0 (0/177) | 0 (0/1003) |
| Serum sample | – | – | – | – | – | – | – | 0 (0/170) | 0 (0/20) | 0 (0/38) | – | 0 (0/228) | 0 (0/19) | 0 (0/247) | |
| Hepatitis D virus | Liver tissue sample | 0 (0/52) | 0 (0/1) | 0 (0/1) | 0 (0/121) | 0 (0/6) | 0 (0/21) | 0 (0/202) | 0 (0/461) | 0 (0/64) | 0 (0/98) | 0 (0/1) | 0 (0/624) | 0 (0/177) | 0 (0/1003) |
| Serum sample | – | – | – | – | – | – | – | 0 (0/170) | 0 (0/20) | 0 (0/38) | – | 0 (0/228) | 0 (0/19) | 0 (0/247) | |
| Adenovirus | Liver tissue sample | 0 (0/52) | 0 (0/1) | 0 (0/1) | 0 (0/121) | 0 (0/6) | 0 (0/21) | 0 (0/202) | 0(0/461) | 0 (0/64) | 1.02 (1/98) | 0 (0/1) | 0.16 (1/624) | 0 (0/177) | 0.10 (1/1003) |
| Serum sample | – | – | – | – | – | – | – | 0 (0/170) | 0 (0/20) | 0 (0/38) | – | 0 (0/228) | 0 (0/19) | 0 (0/247) | |
| Influenza A virus | Liver tissue sample | 5.77 (3/52) | 0 (0/1) | 100 (1/1) | 1.65 (2/121) | 0 (0/6) | 0 (0/21) | 2.97 (6/202) | 3.47 (16/461) | 1.56 (1/64) | 1.02 (1/98) | 0 (0/1) | 2.88 (18/624) | 43.50 (77/177) | 10.06 (101/1003) |
| Serum sample | – | – | – | – | – | – | – | 0 (0/170) | 0 (0/20) | 0 (0/38) | – | 0 (0/228) | 0 (0/19) | 0 (0/247) | |
| Herpesvirus | Liver tissue sample | 15.38 (8/52) | 0 (0/1) | 0 (0/1) | 28.10 (34/121) | 0 (0/6) | 0 (0/21) | 20.79 (42/202) | 24.30 (112/461) | 17.19 (11/64) | 14.28 (14/98) | 0 (0/1) | 21.96 (137/624) | 2.26 (4/177) | 18.24 (183/1003) |
| Serum sample | – | – | – | – | – | – | – | 0 (0/170) | 0 (0/20) | 0 (0/38) | – | 0 (0/228) | 0 (0/19) | 0 (0/247) | |
| Parechovirus | Liver tissue sample | 0 (0/52) | 0 (0/1) | 0 (0/1) | 0 (0/121) | 0 (0/6) | 0 (0/21) | 0 (0/202) | 0 (0/461) | 0 (0/64) | 0 (0/98) | 0 (0/1) | 0 (0/624) | 0 (0/177) | 0 (0/1003) |
| Serum sample | – | – | – | – | – | – | – | 0 (0/170) | 0 (0/20) | 0 (0/38) | – | 0 (0/228) | 0 (0/19) | 0 (0/247) | |
| Chikungunya virus | Liver tissue sample | 0 (0/52) | 0 (0/1) | 0 (0/1) | 0 (0/121) | 0 (0/6) | 0 (0/21) | 0 (0/202) | 0 (0/461) | 0 (0/64) | 0 (0/98) | 0 (0/1) | 0 (0/624) | 0 (0/177) | 0 (0/1003) |
| Serum sample | – | – | – | – | – | – | – | 0 (0/170) | 0 (0/20) | 0 (0/38) | – | 0 (0/228) | 0 (0/19) | 0 (0/247) | |
| Dengue virus | Liver tissue sample | 0 (0/52) | 0 (0/1) | 0 (0/1) | 0 (0/121) | 0 (0/6) | 0 (0/21) | 0 (0/202) | 0 (0/461) | 0 (0/64) | 0 (0/98) | 0 (0/1) | 0 (0/624) | 0 (0/177) | 0 (0/1003) |
| Serum sample | – | – | – | – | – | – | – | 0 (0/170) | 0 (0/20) | 0 (0/38) | – | 0 (0/228) | 0 (0/19) | 0 (0/247) | |
| Zika virus | Liver tissue sample | 0 (0/52) | 0 (0/1) | 0 (0/1) | 0 (0/121) | 0 (0/6) | 0 (0/21) | 0 (0/202) | 0.87 (4/461) | 0 (0/64) | 0 (0/98) | 0 (0/1) | 0.64 (4/624) | 1.13 (2/177) | 0.60 (6/1003) |
| Serum sample | – | – | – | – | – | – | – | 0 (0/170) | 0 (0/20) | 0 (0/38) | – | 0 (0/228) | 0 (0/19) | 0 (0/247) | |
| Ljungan virus | Liver tissue sample | 0 (0/52) | 0 (0/1) | 0 (0/1) | 0 (0/121) | 0 (0/6) | 0 (0/21) | 0 (0/202) | 0 (0/461) | 0 (0/64) | 0 (0/98) | 0 (0/1) | 0 (0/624) | 0 (0/177) | 0 (0/1003) |
| Serum sample | – | – | – | – | – | – | – | 0 (0/170) | 0 (0/20) | 0 (0/38) | – | 0 (0/228) | 0 (0/19) | 0 (0/247) | |
| Pegivirus | Liver tissue sample | 0 (0/52) | 0 (0/1) | 0 (0/1) | 0 (0/121) | 0 (0/6) | 0 (0/21) | 0 (0/202) | 9.11 (42/461) | 3.12 (2/64) | 5.10 (5/98) | 0 (0/1) | 7.85 (49/624) | 5.65 (10/177) | 5.88 (59/1003) |
| Serum sample | – | – | – | – | – | – | – | 18.24 (31/170) | 15.00 (3/20) | 5.26 (2/38) | – | 15.79 (36/228) | 5.26 (1/19) | 14.98 (37/247) | |
| Torque teno virus | Liver tissue sample | 0 (0/52) | 0 (0/1) | 0 (0/1) | 0 (0/121) | 0 (0/6) | 0 (0/21) | 0 (0/202) | 60.09 (277/461) | 39.06 (25/64) | 17.35 (17/98) | 0 (0/1) | 51.12 (319/624) | 0.56 (1/177) | 31.90 (320/1003) |
| Serum sample | – | – | – | – | – | – | – | 60.00 (102/170) | 40.00 (8/20) | 42.10 (16/38) | – | 52.72 (126/239) | 5.26 (1/19) | 51.42 (127/247) | |
| SEN-virus | Liver tissue sample | 0 (0/52) | 0 (0/1) | 0 (0/1) | 0 (0/121) | 0 (0/6) | 0 (0/21) | 0 (0/202) | 0 (0/461) | 0 (0/64) | 0 (0/98) | 0 (0/1) | 0 (0/624) | 0 (0/177) | 0 (0/1003) |
| Serum sample | – | – | – | – | – | – | – | 0 (0/170) | 0 (0/20) | 0 (0/38) | – | 0 (0/228) | 0 (0/19) | 0 (0/247) | |
| KIs-virus | Liver tissue sample | 0 (0/52) | 0 (0/1) | 0 (0/1) | 0 (0/121) | 0 (0/6) | 0 (0/21) | 0 (0/202) | 0 (0/461) | 0 (0/64) | 0 (0/98) | 0 (0/1) | 0 (0/624) | 0 (0/177) | 0 (0/1003) |
| Serum sample | – | – | – | – | – | – | – | 0 (0/170) | 0 (0/20) | 0 (0/38) | – | 0 (0/228) | 0 (0/19) | 0 (0/247) | |
Bold values indicates the total and subtotal numbers of the animals.