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. 2021 May 22;13(5):e15182. doi: 10.7759/cureus.15182

Table 1. Characteristics of genetic factors associated with disc degeneration.

Abbreviations: USA- United States of America, VNTR- variable number of tandem repeats, DDD- degenerative disc disease, OR- odds ratio, CI- confidence interval, p- p-value, SNP- single nucleotide polymorphism, LDH- lumbar disc herniation, IL-1⍺- interleukin 1 alpha, IDD- intervertebral disc degeneration, MMP- matrix metalloproteinase, ECM- extracellular matrix, MMP2- matrix metallopeptidase 2, a- systematic review and meta-analysis

  Gene name   Genomic region   Encoded-protein family Selected studies Number of studies includeda Countries or ethnicities included   Findings
ACAN aggrecan   15q26.1 aggrecan/versican proteoglycan family Cong et al. 2018 [10] a 5 China, Turkey, USA, Japan, South Korea, Finland  VNTR polymorphism on allele 21 was over-represented and was found to increase the risk of DDD.
COL11A1 collagen type XI alpha 1 chain   1p21.1   type XI collagen   Liu et al. 2017 [11] N/A China SNP rs1676486 may be functionally associated with LDH.
COL1A1 collagen type I alpha 1 chain   17q21.33   type I collagen Hanaei et al. 2020 [12]   N/A Iran SNP rs909102 was not significantly associated with DDD.  
Pluijm et al. 2004 [13] N/A Netherlands COLIA1 Sp1 polymorphism may be beneficial for the prediction of DDD in older patients.
COL9A3 collagen type IX alpha 3 chain     20q13.33             type IX collagen Huang et al. 2018 [14] a   11 Iran, Finland, Greece, USA, India, China, Turkey COL9A3 trp3 polymorphism did not seem to be connected to the risk of IDD in any gender, continent or ethnicity of people.
Wu et al. 2018 [15] a         10   Finland, Japan, China, South Korea, India, Denmark COL9A3 gene (rs61734651) and COL9A2 gene (rs12077871, rs12722877, rs7533552) polymorphisms were not associated with susceptibility to LDD.
COL9A2 collagen type IX alpha 2 chain   1p34.2   Hanaei et al. 2020 [12]   N/A   Iran COL9A2 rs137853213 was not significantly associated with DDD.
  IL1A interleukin 1 alpha       2q14.1       IL 1 cytokine family   Ahn et al. 2002 [16] N/A South Korea Suggests that IL-1⍺ exists in herniated discs but does not seem to be an abundant proinflammatory cytokine.  
Chen. et al. 2018 [17] N/A China IL-1α -889C/T polymorphism was associated with an increased risk of IDD.
  MMP2   matrix metalloproteinase 2       16q12.2       zinc-dependent proteinase family   Zhang et al. 2013 [18]   N/A   China The -735 C/T polymorphism of MMP2 may be associated with the risk and severity of LDD. 
Dong et al. 2007 [19] N/A China The frequency of the MMP-2 -1306CC genotype was significantly higher in patients with LDD than in the healthy population (26)   A threefold increased risk for LDD was also estimated with the CC genotype.
VDR vitamin D receptor     12q13.11   nuclear hormone receptor superfamily of ligand-inducible transcription factors Pekala et al. 2018 [20] a 7 Caucasian, Hispanic, Asian There is no evidence of an association between the FokI (rs2228570) polymorphism and IDD in the general population. Ethnic-specific analyses show that Caucasians with FokI have decreased risk of IDD, while Hispanics with FokI have significantly higher risk of IDD.
Jiang et al. 2016 [21] a 23 Caucasian, Asian TaqI, FokI, and ApaI polymorphisms of the VDR gene were not significantly associated with the predisposition of LDD.