TABLE 4.
RNA-Seq clean reads and the counts, percentage of reads mapping statistics to Aspergillus niger CBS 513.88 genome.
| Sample | Raw reads | Clean reads | Clean bases | Q20 (%) | Q30 (%) | Total mapped | Uniquely mapped | |
| Control | AN5_1 | 54.46 Mb | 53.76 Mb | 7.99 Gb | 98.30 | 95.02 | 50.86 Mb (94.62%) | 45.47 Mb (84.59%) |
| AN5_2 | 54.60 Mb | 53.90 Mb | 8.00 Gb | 98.17 | 94.69 | 51.22 Mb (95.02%) | 45.42 Mb (84.27%) | |
| AN5_3 | 51.42 Mb | 50.76 Mb | 7.52 Gb | 98.23 | 94.87 | 48.37 Mb (95.29%) | 41.94 Mb (82.63%) | |
| Cocultured | AN5_co_1 | 51.09 Mb | 50.46 Mb | 7.39 Gb | 98.37 | 95.24 | 47.12 Mb (93.37%) | 42.54 Mb (84.30%) |
| A.niger CBS 513.88 | AN5_co_2 | 52.09 Mb | 51.42 Mb | 7.67Gb | 98.16 | 94.69 | 48.79 Mb (94.89%) | 46.16 Mb (89.77%) |
| transcriptome | AN5_co_3 | 52.74 Mb | 52.12 Mb | 7.74 Gb | 98.30 | 95.02 | 49.53 Mb (95.03%) | 45.61 Mb (87.51%) |
AN5-A. niger CBS 513.88; AN5_co-A. niger CBS 513.88 co-cultured with M. ruber M7.