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. 2021 Jun 9;12:670684. doi: 10.3389/fmicb.2021.670684

TABLE 4.

RNA-Seq clean reads and the counts, percentage of reads mapping statistics to Aspergillus niger CBS 513.88 genome.

Sample Raw reads Clean reads Clean bases Q20 (%) Q30 (%) Total mapped Uniquely mapped
Control AN5_1 54.46 Mb 53.76 Mb 7.99 Gb 98.30 95.02 50.86 Mb (94.62%) 45.47 Mb (84.59%)
AN5_2 54.60 Mb 53.90 Mb 8.00 Gb 98.17 94.69 51.22 Mb (95.02%) 45.42 Mb (84.27%)
AN5_3 51.42 Mb 50.76 Mb 7.52 Gb 98.23 94.87 48.37 Mb (95.29%) 41.94 Mb (82.63%)
Cocultured AN5_co_1 51.09 Mb 50.46 Mb 7.39 Gb 98.37 95.24 47.12 Mb (93.37%) 42.54 Mb (84.30%)
A.niger CBS 513.88 AN5_co_2 52.09 Mb 51.42 Mb 7.67Gb 98.16 94.69 48.79 Mb (94.89%) 46.16 Mb (89.77%)
transcriptome AN5_co_3 52.74 Mb 52.12 Mb 7.74 Gb 98.30 95.02 49.53 Mb (95.03%) 45.61 Mb (87.51%)

AN5-A. niger CBS 513.88; AN5_co-A. niger CBS 513.88 co-cultured with M. ruber M7.