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. 2021 Jun 23;16(6):e0253658. doi: 10.1371/journal.pone.0253658

Table 1. Characteristics of the included studies.

Author Year County Sample type Reference Diagnosis Target gene PCR method N TP FP FN TN Type of research Sample condition Patient selection method
Che, N. 2017 China Pleural effusion CRS Tuberculosis pleurisy IS6110 Real-Time PCR 78 45 0 15 18 prospective Frozen Consecutive
Yang, J.a 2017 China Plasma CRS Pulmonary TB IS6110 Digital PCR 56 28 0 0 28 Case-control Frozen Convenience
Yang, J.b 2017 China Plasma CRS Extrapulmonary TB IS6110 Digital PCR 56 28 0 0 28 Case-control Frozen Convenience
Yang, J.c 2017 China Plasma CRS Pulmonary TB IS6110 Real-Time PCR 56 14 0 14 28 Case-control Frozen Convenience
Yang, J.d 2017 China Plasma CRS Extrapulmonary TB IS6110 Real-Time PCR 56 15 0 13 28 Case-control Frozen Convenience
Shou, J. 2018 China Pleural effusion CRS Tuberculosis pleurisy Unreported Real-Time PCR 136 65 0 38 33 prospective Fresh Consecutive
Li, X. 2020 China Cerebrospinal fluid CRS Tuberculosis meningitis IS6110 Real-Time PCR 68 26 0 20 22 prospective Fresh Consecutive
Lyu, L.a 2020 China Plasma CRS Pulmonary and extrapulmonary TB IS6110 Digital PCR 261 63 7 92 99 Case-control Frozen Consecutive
Lyu, L.b 2020 China Plasma CRS Pulmonary and extrapulmonary TB IS1081 Digital PCR 261 42 7 113 99 Case-control Frozen Consecutive
Shao, L. 2020 China Cerebrospinal fluid CRS Tuberculosis meningitis IS6110 Real-Time PCR 84 32 0 28 24 prospective Frozen Consecutive
Sharma, P. 2020 India Ascitic fluid CRS Abdominal tuberculosis devR Real-Time PCR 65 22 1 33 9 prospective Frozen Consecutive
Yang, X. 2020 China Pleural effusion CRS Tuberculosis pleurisy IS6110 Real-Time PCR 286 153 0 68 65 prospective Frozen Consecutive
Han, B.a 2020 China Plasma CRS Pulmonary TB Unreported Real-Time PCR 140 63 3 16 58 Case-control Frozen Convenience
Han, B.b 2020 China Plasma CRS Extrapulmonary TB Unreported Real-Time PCR 100 31 3 8 58 Case-control Frozen Convenience
Ushio, R.a 2016 Japan Plasma Culture Pulmonary TB IS6110 Digital PCR 52 21 1 12 18 Case-control Frozen Convenience
Ushio, R.b 2016 Japan Plasma Culture Pulmonary TB gyrB Digital PCR 52 10 0 23 19 Case-control Frozen Convenience
Labugger, I. 2017 Germany Urine Culture Pulmonary TB IS6110 Real-Time PCR 19 7 0 4 8 Prospective Frozen Consecutive
Patel, K. 2018 South Africa Urine Culture Pulmonary TB DR region Real-Time PCR 412 75 27 100 210 Cohort study Frozen Convenience

PCR, polymerase chain reaction; TP, true positive; FP, false positive; FN, false negative; TN, true negative; CRS, composite reference standard; TB, tuberculosis; DR, direct repeat.