Table 2. Binding energy values (Kcal mol−1), obtained by docking simulations, between putative plant OBPs and isoprenoid VOCs.
OBPs | α-Pinene | Limonene | β-Myrcene | β-Caryophyllene | Isoprene | Linalool |
---|---|---|---|---|---|---|
TPL-like | −5.06 | −4.76 | −3.95 | −6.16 | −3.39 | −3.94 |
ABA receptor | −4.69 | −4.73 | −3.84 | −6.32 | −3.35 | −4.12 |
GA receptor | −5.50 | −5.44 | −4.92 | −6.94 | −3.78 | −4.69 |
Heading Date 3A | −5.46 | −4.99 | −4.29 | −6.83 | −3.44 | −4.79 |
FT | −5.23 | −5.07 | −4.26 | −6.65 | −3.15 | −4.98 |
TFL1 | −5.30 | −5.53 | −4.38 | −7.15 | −3.70 | −4.98 |
Partial JA receptor | −5.23 | −4.79 | −4.16 | −6.05 | −2.78 | −4.21 |
Complete JA receptor | −5.92 | −5.11 | −4.41 | −6.61 | −2.82 | −4.49 |
SABP2 | −6.03 | −6.12 | −5.14 | −6.73 | −3.25 | −4.70 |
Reference protein* | −5.42 | −6.29 | −4.15 | Not available | Not available | Not available |
*Reference protein is the protein for which it has been found an experimental complex with the ligand. For α-pinene, limonene, and β-myrcene, the reference proteins are cytochrome P450 2B6 complexed with α-pinene (PDB code: 4I91), lipid binding protein complexed with limonene 1,2 epoxide (PDB code: 2A2G, and linalool dehydratase/isomerase complexed with β-myrcene [PDB code: 5HSS]), respectively.