Table 1.
Primer sequences and amplification programs.
Gene | Primers sequence | Conditions | Product size (bp) | Ref |
---|---|---|---|---|
HBD-2 | 5’-CCAGCCATCAGCCATGAGGGT-3’ 5’- GGAGCCCTTTCTGAATCCGCA-3’ |
10’’at 95°C, 5”at 60°C, 10” for 40 cycles | 254 | Fusco et al. (2017) |
HBD-3 | 5’- CGGCAGCATTTTGCGCCA-3’ 5’- CTAGCAGCTATGAGGATC-3’ |
10’’at 95°C, 4”at 58°C, 8” for 40 cycles | 206 | Fusco et al. (2017) |
Occludin | 5’-TCAGGGAATATCCACCTATCACTTCAG-3’ 5’-CATCAGCAGCAGCCATGTACTCTTCAC-3’ |
10’’at 95°C, 45”at 60°C for 40 cycles | 188 | Cuffaro et al. (2020) |
Zonulin-1 | 5’-AGGGGCAGTGGTGGTTTTCTGTTCTTTC-3’ 5’-GCAGAGGTCAAAGTTCAAGGCTCAAGAGG-3’ |
10’’at 95°C, 45”at 60°C for 40 cycles | 217 | Wilms et al. (2019) |
Claudin-1 | 5’-CTGGGAGGTGCCCTACTTTG-3’ 5’-ACACGTAGTCTTTCCCGCTG-3’ |
1’’at 95°C, 30” at 60°C, 20’’at 72°C for 40 cycles | 128 | Wu et al. (2018) |
MUC-2 | 5’-CTGCACCAAGACCGTCCTCATG-3’ 5’-GCAAGGACTGAACAAAGACTCAGAC-3’ |
5’’at 96°C, 16” at 60°C, 8’’at 72°C for 40 cycles |
401 | Perrais et al. (2002) |
Bcl-2 | 5’-CAGCTGCACCTGACGCCCTT-3’ 5’-CCCAGCCTCCGTTATCCTGGA-3’ |
5’’at 94°C, 7” at 58°C, 9’’at 72°C for 40 cycles | 235 | Fusco et al. (2018) |
Fas-L | 5’-GGATTGGGCCTGGGGATGTTTCA-3’ 5’-TTGTGGCTCAGGGGCAGGTTGTTG-3’ |
5’’at 95°C, 7” at 60°C, 14’’at 72°C for 40 cycles | 344 | Fusco et al. (2018) |
Fas-R | 5’- CCAAGTGACTGACATCAACTC-3’ 5’- CTCTTTGCACTTGGTGTTGCTGG -3’ |
5”at 94°C, 8”at 55°C, 17”at 72°C for 40 cycles | 426 | Fusco et al. (2018) |
β-actin | 5’-GACGACGACAAGATAGCCTAGCAGCTATGAGGATC-3’ 5’-GAGGAGAAGCCCGGTTAACTTCCGCAGCATTTTGCGCCA-3’ |
243 | Fusco et al. (2018) |