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. 2021 Jun 24;35(7):771–802. doi: 10.1007/s10822-021-00397-3

Table 1.

Method names, category, and submission type for all the log P calculation submissions

Method name Category Submission type
ClassicalGSG DB2 [8486] Empirical Blind
TFE MLR [87] Empirical Blind
ClassicalGSG DB4 [8486] Empirical Blind
Chemprop [88] Empirical Blind
TFE-SM8-vacuum-opt Physical (QM) Blind
GROVER Empirical Blind
ClassicalGSG DB1 [8486] Empirical Blind
ffsampled_deeplearning_cl1 Empirical Blind
ClassicalGSG DB3 [8486] Empirical Blind
COSMO-RS [89] Physical (QM) Blind
TFE_Attentive_FP Empirical Blind
ffsampled_deeplearning_cl2 Empirical Blind
TFE-SM12-vacuum-opt Physical (QM) Blind
TFE-SM8-solvent-opt Physical (QM) Blind
REF1 ChemAxon [80] Empirical Reference
TFE IEFPCM MST [90] Physical (QM) Blind
TFE MD neat oct (GAFF/TIP4P) Physical (MM) Blind
NULL0 mean clogP FDA [38] Empirical Reference
NES-1 (GAFF2/OPC3) G Physical (MM) Blind
NES-1 (GAFF2/OPC3) J Physical (MM) Blind
NES-1 (GAFF2/OPC3) B Physical (MM) Blind
MD (GAFF/TIP3P) [91] Physical (MM) Blind
TFE wet oct (GAFF/TIP4P) Physical (MM) Blind
MD (CGenFF/TIP3P) [91] Physical (MM) Blind
EC_RISM_wet [92] Physical (QM) Blind
TFE-SMD-vacuum-opt Physical (QM) Blind
MD-EE-MCC (GAFF-TIP4P-Ew) [93] Physical (MM) Blind
TFE b3lypd3 [94] Physical (QM) Blind
MD (OPLS-AA/TIP4P) [91] Physical (MM) Blind
MD LigParGen (OPLS-AA/TIP4P) [91] Physical (MM) Blind
TFE-SMD-solvent-opt Physical (QM) Blind
TFE-NHLBI-TZVP-QM Physical (QM) Blind
Ensemble EPI physprop Empirical Blind
Ensemble Martel Empirical Blind
QSPR_Mordred2D_TPOT_AutoML Empirical Blind
TFE-NHLBI-NN-IN Empirical Blind

The “submission type” column indicates if submission was a blind submission (denoted by “Blind”) or a post-deadline reference or null calculation (denoted by “Reference”). The table is ordered from lowest to highest RMSE, although many consecutively listed methods are statistically indistinguishable. All calculated error statistics are available in Table S1