Table 1.

Typical approaches in omics measurements.

	sequencing-based	microarray-based	others
genetics	whole-genome-seq, whole-exome-seq	Illumina OMNI5, Immunochip etc.	–
epigenetics	ATAC-seq, whole-genome bisulfite-seq, RRBS-seq, DNase-seq, FAIRE-seq, ChIP-seq, etc.	MethylationEPIC BeadChip, ChIP-chip, etc.	–
3D chromosome	Hi-C, etc.	–	–
gene expression	RNA-seq, scRNA-seq, SLAM-seq	Affymetrix Genome U133 array, Illumina Whole-Genome Gene Expression BeadChips, etc.	–
protein level	–	–	Immunoassay, MS -based approaches
metabolites	–	–	NMR, MS-based approaches
microbiome	16s rRNA-seq, metagenomics, etc.	–	–
cellomics	single cell sequencing approaches	–	FCM, CyTOF