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. 2021 Jun 11;12:668644. doi: 10.3389/fmicb.2021.668644

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Copyright © 2021 Tláskal, Pylro, Žifčáková and Baldrian.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Pangenome analysis of the available Sodalis genomes. Genes (indicated by dark colors within the circles) were clustered based on orthologous similarity (inner tree), and genome layers were sorted based on a gene frequency tree (right upper tree). Sodalis guilds are color coded; deadwood-associated strains in orange, tsetse fly symbionts in red and insect symbionts with S. praecaptivus in green. ANI is indicated as the upper right heatmap. Pangenome analysis identified core genes shared by all genomes (bar plots in hues of blue), genes associated with non-symbiotic life (bar plots in hues of yellow) and genes associated with wood habitat (bar plots in hues of orange). Individual bar plots show counts of genes divided according to their function.