Table 2.
Non-Neoparamoeba perurans proteins of bacterial origin identified in attenuated and virulent N. perurans exoproteomes. Proteins are ranked based on relevance to extracellular function. The complete set of identifications are provided in Supplementary Materials Table S4.
| Gene | Protein IDs | Fasta Headers | Organism | Mol. Weight (kDa) | Fold Change 1 | Att. Peptides 2 | Vir Peptides 2 | t-Test 3 |
|---|---|---|---|---|---|---|---|---|
| ST37_14230 | A0A1X1MR06 | ABC transporter substrate-binding protein | Vibrio sp. qd031 | 47.26 | −3.18528 | 6 | 0 | + |
| VS_II0220 | B7VQI9 | Maltodextrin-binding protein | Vibrio tasmaniensis (strain LGP32 | 42.39 | −4.90439 | 13 | 4 | + |
| VS_0355 | B7VIC7 | Immunogenic protein | Vibrio tasmaniensis (strain LGP32) | 34.44 | −5.20998 | 11 | 1 | + |
| ahpCB | Q3IE21 | Peroxiredoxin 2 (TSA) (PRP) | Pseudoalteromonas haloplanktis (strain TAC 125) | 22.12 | −4.75659 | 9 | 0 | + |
| PSHAa297; B1199_19990 | Q3IK06; A0A244CKW5 | Secreted alkaline phosphatase; Alkaline phosphatase | Pseudoalteromonas haloplanktis (strain TAC 125); Pseudoalteromonas ulvae | 56.1 | −4.1791 | 10 | 2 | + |
| PCIT_22080 | U1KK96 | Peptidase S8/S53 subtilisin kexin sedolisin | Pseudoalteromonas citrea DSM 8771 | 127.37 | −3.70559 | 6 | 3 | + |
The + sign = statistically significant differential proteins (based on q-value); 1 Fold change of virulent proteins related to attenuated proteins; 2 Razor and unique peptide counts (attenuated and virulent); 3 Student’s t test significance.