Table 1.

SARS-CoV-2 lineages identified from 596 samples in Cyprus from April 2020 to January 2021.

Time-Period	April–June 2020	July–September 2020	October–November 2020	December 2020–January 2021	Total
Lineage	Number of Sequences Per Lineage (%)	Number of Sequences Per Lineage (%)	Number of Sequences Per Lineage (%)	Number of Sequences Per Lineage (%)	Number of Sequences Per Lineage (%)
A	1 (0.51)	-	-	-	1 (0.17)
B	5 (2.56)	-	-	-	5 (0.84)
B.1	17 (8.72)	1 (1.32)	-	-	18 (3.02)
B.1.1.1	-	6 (7.89)	1 (0.61)	-	7 (1.17)
B.1.1.7	-	-	-	10 (6.17)	10 (1.68)
B.1.1.29	144 (73.85)	-	1 (0.61)	2 (1.23)	147 (24.66)
B.1.1.41	4 (2.05)	-	-	-	4 (0.67)
B.1.1.67	-	1 (1.32)	-	-	1 (0.17)
B.1.1.130	1 (0.51)	-	-	-	1 (0.17)
B.1.1.131	2 (1.03)	-	-	-	2 (0.34)
B.1.1.141	-	-	-	2 (1.23)	2 (0.34)
B.1.1.153	-	-	3 (1.84)	-	3 (0.5)
B.1.1.159	1 (0.51)	-	1 (0.61)	-	2 (0.34)
B.1.1.161	5 (2.56)	-	-	-	5 (0.84)
B.1.1.192	-	2 (2.63)	-	-	2 (0.34)
B.1.1.218	-	1 (1.32)	1 (0.61)	-	2 (0.34)
B.1.1.230	-	1 (1.32)	-	-	1 (0.17)
B.1.1.251	4 (2.05)	-	-	-	4 (0.67)
B.1.1.277	4 (2.05)	-	-	-	4 (0.67)
B.1.1.288	-	2 (2.63)	-	-	2 (0.34)
B.1.1.307	-	1 (1.32)	-	-	1 (0.17)
B.1.1.315	-	-	-	1 (0.62)	1 (0.17)
B.1.1.317	-	2 (2.63)	-	-	2 (0.34)
B.1.2	1 (0.51)	18 (23.68)	-	-	19 (3.19)
B.1.36	-	2 (2.63)	-	-	2 (0.34)
B.1.160	-	1 (1.32)	1 (0.61)	-	2 (0.34)
B.1.177	1 (0.51)	-	30 (18.4)	10 (6.17)	41 (6.88)
B.1.177.8	-	-	1 (0.61)	-	1 (0.17)
B.1.221.1	-	-	1 (0.61)	-	1 (0.17)
B.1.236	-	6 (7.89)	-	-	6 (1.01)
B.1.258	2 (1.03)	32 (42.11)	123 (75.46)	136 (83.95)	293 (49.16)
B.1.258.17	-	-	-	1 (0.62)	1 (0.17)
B.1.313	2 (1.03)	-	-	-	2 (0.34)
B.6	1 (0.51)	-	-	-	1 (0.17)
Total	195	76	163	162	596