Table 1.
Similarities of nucleotides (nt) and amino acids (aa) of the complete genome of porcine circovirus 3 (PCV-3) sequences reported in this study and representative strains from other countries. The complete PCV-3 sequences were analyzed using BioEdit version 7.2.6.1 [30].
| Representative PCV-3 Strains | Representative Strains in This Study | |||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| Species | Continent | Country | Strain | Year | MT075517 | MT075518 | MT075519 | |||
| nt | aa | nt | aa | nt | aa | |||||
| Swine | Asia | China | MG650176 | 1996 | 99.6 | 99.8 | 99.6 | 99.8 | 99.6 | 99.8 |
| China | MG372488 | 2006 | 99.3 | 99.5 | 99.3 | 99.5 | 99.3 | 99.5 | ||
| China | MG372490 | 2006 | 99.3 | 99.5 | 99.3 | 99.5 | 99.3 | 99.5 | ||
| China | MG897494 | 2017 | 99.6 | 99.8 | 99.6 | 99.8 | 99.6 | 99.8 | ||
| China | MF155642 | 2018 | 98.9 | 99.1 | 98.9 | 99.1 | 98.9 | 99.1 | ||
| Taiwan | MK343155 | 2013 | 99.5 | 99.6 | 99.5 | 99.6 | 99.5 | 99.6 | ||
| Korea | MF063071 | 2016 | 98.7 | 99.0 | 98.7 | 99.0 | 98.7 | 99.0 | ||
| Japan | LC383841 | 2016 | 99.3 | 99.6 | 99.3 | 99.6 | 99.3 | 99.6 | ||
| Thailand | MH229786 | 2017 | 99.3 | 99.5 | 99.3 | 99.5 | 99.3 | 99.5 | ||
| Malaysia | MK585351 | 2017 | 99.5 | 99.8 | 99.5 | 99.8 | 99.5 | 99.8 | ||
| Russia | MG679916 | 2017 | 99.7 | 99.8 | 99.7 | 99.8 | 99.7 | 99.8 | ||
| India | MK934768 | 2018 | 98.6 | 98.8 | 98.6 | 98.8 | 98.6 | 98.8 | ||
| Europe | Denmark | MF805724 | 2017 | 98.9 | 99.1 | 98.9 | 99.1 | 98.9 | 99.1 | |
| Germany | MG014376 | 2015 | 99.3 | 99.5 | 99.3 | 99.5 | 99.3 | 99.5 | ||
| Sweden | MG765473 | 2004 | 98.6 | 98.8 | 98.6 | 98.8 | 98.6 | 98.8 | ||
| Spain | MF805720 | 2017 | 99.6 | 99.8 | 99.6 | 99.8 | 99.6 | 99.8 | ||
| Hungary | MG597441 | 2017 | 99.7 | 99.8 | 99.7 | 99.8 | 99.7 | 99.8 | ||
| Italy | MF805719 | 2017 | 99.6 | 99.8 | 99.6 | 99.8 | 99.6 | 99.8 | ||
| Serbia | MK117051 | 2019 | 99.7 | 99.9 | 99.7 | 99.9 | 99.7 | 99.9 | ||
| North America | USA | KT869077 | 2015 | 98.7 | 99.1 | 98.7 | 99.1 | 98.7 | 99.1 | |
| USA | KX898030 | 2016 | 98.5 | 98.8 | 98.5 | 98.8 | 98.5 | 98.8 | ||
| USA | KX966193 | 2016 | 99.5 | 99.6 | 99.5 | 99.6 | 99.5 | 99.6 | ||
| Mexico | MH192340 | 2017 | 99.5 | 99.8 | 99.5 | 99.8 | 99.5 | 99.8 | ||
| South America | Colombia | MH327785 | 2018 | 99.3 | 99.5 | 99.3 | 99.5 | 99.3 | 99.5 | |
| Chile | MN907812 | 2019 | 99.6 | 99.8 | 99.6 | 99.8 | 99.6 | 99.8 | ||
| Brazil | MF079254 | 2016 | 99.6 | 99.9 | 99.6 | 99.9 | 99.6 | 99.9 | ||
| Brazil | MF079253 | 2016 | 98.7 | 99.0 | 98.7 | 99.0 | 98.7 | 99.0 | ||
| Brazil | MK645715 | 2018 | 99.6 | 100 | 99.6 | 100 | 99.6 | 100 | ||
| Brazil | MK645718 | 2018 | 99.8 | 100 | 99.8 | 100 | 99.8 | 100 | ||
| Brazil | MK645719 | 2018 | 99.8 | 100 | 99.8 | 100 | 99.8 | 100 | ||
| Brazil | MK645716 | 2018 | 99.6 | 100 | 99.6 | 100 | 99.6 | 100 | ||
| Brazil | MK645717 | 2018 | 99.3 | 99.8 | 99.3 | 99.8 | 99.3 | 99.8 | ||
| Wild boar | Europe | Spain | MH579736 | 2005 | 99.2 | 99.5 | 99.2 | 99.5 | 99.2 | 99.5 |
| Spain | MH579747 | 2018 | 98.7 | 99.3 | 98.7 | 99.3 | 98.7 | 99.3 | ||
| Germany | MK280624 | 2018 | 98.6 | 99.1 | 98.6 | 99.1 | 98.6 | 99.1 | ||
| South America | Brazil | MH699985 | 2018 | 98.7 | 98.9 | 98.7 | 98.9 | 98.7 | 98.9 | |