Table 1.
Summary of Cryptosporidium genome assembly data available in the NCBI GenBank.
| Cryptosporidium Species | # of Genome Sequences Available | Sequencing Technology | Gene Evidence Availability | |||
|---|---|---|---|---|---|---|
| RNAseq a | Expressed Sequence Tag Datasets | Proteomic Data | # of Genome Annotations Available | |||
| C. parvum | 19 | Sanger, Illumina, 454, ABI SOLiD, PacBio, ONT, HAPPY map data | Yes | Yes | Yes | 2 |
| C. hominis | 12 | Sanger, Illumina, Ion Torrent, 454 | Yes | Yes | Yes | 5 |
| C. ubiquitum | 5 | Illumina | No | No | No | 1 |
| C. meleagridis | 3 | Illumina | No | No | No | 1 |
| C. andersoni | 3 | Illumina | No | No | No | 1 |
| C. muris | 1 | Sanger and 454 | No | No | Yes | 1 |
| C. tyzzeri | 1 | Illumina | No | No | No | 1 |
| C. felis | 1 | Illumina | No | No | No | 1 |
| C. cuniculus | 1 | Illumina | No | No | No | 0 |
| C. ryanae | 1 | Illumina | No | No | No | 0 |
| C. bovis | 1 | Illumina | No | No | No | 0 |
| C. viatorum | 1 | Illumina | No | No | No | 0 |
| C. sp. 37763 | 1 | Illumina | No | No | No | 0 |
| C. sp. chipmunk LX-2015 | 1 | Illumina | No | No | No | 0 |
| C. baileyi | 1 | Illumina, PacBio | Yes | Yes | No | 0 |
a not available for all lifecycle stages. Most data represent only extracellular oocyst and sporozoite lifecycle stages. # means Number.