Table 1.
Transcription factors that were transcriptionally regulated by TG1-E1 in drought-stressed tomato plants (Micro-Tom). The differentially expressed genes (DEGs) were defined by log2 fold-change values (LogFC) > 1 or < −1 with FDR < 0.01.
| Gene ID | Annotation | Type of Nucleic Acid Binding Transcription Factor Activity | LogFC |
|---|---|---|---|
| Solyc07g061760.2 | Ankyrin repeats | Ankyrin repeat-containing domain | 2.29 |
| Solyc08g014570.3 | PGG domain | Ankyrin repeat-containing domain | 1.06 |
| Solyc06g076050.3 | Ankyrin repeats | Ankyrin repeat-containing domain | 1.04 |
| Solyc05g052570.3 | Ankyrin repeats | Ankyrin repeat-containing domain | 1.11 |
| Solyc05g013540.1 | AP2 domain | AP2/ERF domain | 1.07 |
| Solyc02g090770.1 | AP2 domain | AP2/ERF domain | 2.79 |
| Solyc08g080290.3 | AP2 domain | AP2/ERF domain | 2.58 |
| Solyc08g007830.1 | AP2 domain | AP2/ERF domain | 4.48 |
| Solyc06g035700.1 | AP2 domain | AP2/ERF domain | 3.41 |
| Solyc08g007820.1 | AP2 domain | AP2/ERF domain | 3.02 |
| Solyc10g050970.1 | AP2 domain | AP2/ERF domain | 3.01 |
| Solyc01g108240.3 | AP2 domain | AP2/ERF domain | 4.22 |
| Solyc10g086530.1 | GRAS domain family | GRAS domain | 1.10 |
| Solyc11g012510.2 | GRAS domain family | GRAS domain | 1.28 |
| Solyc12g005340.2 | GRAS domain family | GRAS domain | 1.77 |
| Solyc08g080540.3 | HSF-type DNA-binding | HSF-type DNA binding | 1.64 |
| Solyc02g089200.3 | SRF-type transcription factor | MADS-box | 1.95 |
| Solyc05g015750.3 | SRF-type transcription factor | MADS-box | 1.67 |
| Solyc01g093960.3 | SRF-type transcription factor | MADS-box | 1.04 |
| Solyc06g059970.3 | SRF-type transcription factor | MADS-box | 1.03 |
| Solyc02g071730.3 | SRF-type transcription factor | MADS-box | 1.09 |
| Solyc08g067230.3 | K-box region | MADS-box/K-box | 2.25 |
| Solyc04g081000.3 | K-box region | MADS-box/K-box | 1.42 |
| Solyc05g015840.3 | SBP domain | SBP-box | 1.17 |
| Solyc10g011910.3 | WRKY DNA -binding domain | Zinc finger domain | 1.84 |
| Solyc03g121400.1 | Dof domain, zinc finger | Zinc finger domain | 1.10 |
| Solyc06g053640.1 | Ring finger domain | Zinc finger domain | 1.85 |
| Solyc10g009550.3 | WRKY DNA -binding domain | Zinc finger domain | 1.40 |
| Solyc08g008280.3 | WRKY DNA -binding domain | Zinc finger domain | 1.28 |
| Solyc04g015360.3 | GATA zinc finger | Zinc finger domain | 1.04 |
| Solyc06g075780.2 | C2H2-type zinc finger | Zinc finger domain | 1.49 |
| Solyc05g051200.1 | AP2 domain | AP2/ERF domain | −1.41 |
| Solyc04g007000.1 | AP2 domain | AP2/ERF domain | −1.80 |
| Solyc03g119390.3 | Helix-loop-helix DNA-binding domain | bHLH domain | −1.55 |
| Solyc03g034000.3 | Helix-loop-helix DNA-binding domain | bHLH domain | −1.53 |
| Solyc12g049320.2 | GRAS domain family | GRAS domain | −1.34 |
| Solyc02g077590.1 | Homeobox domain | HD-Zip domain | −1.34 |
| Solyc05g048830.3 | Myb-like DNA-binding domain | Myb domain | −1.05 |
| Solyc05g053330.3 | Myb-like DNA-binding domain | Myb domain | −1.12 |
| Solyc12g089190.1 | Myb-like DNA-binding domain | Myb domain | −1.27 |
| Solyc12g008800.2 | Myb-like DNA-binding domain | Myb domain | −1.42 |
| Solyc04g076220.3 | Domain of unknown function | PPC domain | −1.30 |
| Solyc05g006340.3 | WD domain, G-beta repeat | WD domain | −1.16 |
| Solyc11g006450.2 | Ring finger domain | Zinc finger domain | −1.22 |
| Solyc05g054650.1 | C2H2-type zinc finger | Zinc finger domain | −1.24 |
| Solyc05g051860.3 | zinc-finger of the FCS-type, C2-C2 | Zinc finger domain | −1.33 |
| Solyc05g015850.3 | WRKY DNA -binding domain | Zinc finger domain | −1.48 |
| Solyc06g008020.3 | HIT zinc finger | Zinc finger domain | −1.15 |
| Solyc00g136260.1 | Ring finger domain | Zinc finger domain | −1.97 |
| Solyc12g008830.2 | GATA zinc finger | Zinc finger domain | −1.44 |
| Solyc03g032060.1 | Ring finger domain | Zinc finger domain | −1.11 |
| Solyc12g006230.2 | Ring finger domain | Zinc finger domain | −1.77 |
| Solyc08g067360.3 | WRKY DNA -binding domain | Zinc finger domain | −1.39 |
| Solyc07g045180.3 | B-box zinc finger | Zinc finger domain | −1.23 |
| Solyc08g082680.3 | Ring finger domain | Zinc finger domain | −1.00 |
| Solyc08g067970.3 | zinc-finger of the FCS-type, C2-C2 | Zinc finger domain | −1.11 |
| Solyc06g061240.3 | PLATZ transcription factor | Zinc finger domain | −1.08 |
| Solyc08g065940.3 | Zinc finger C-x8-C-x5-C-x3-H type | Zinc finger domain | −1.08 |