BLCA	Bladder Cancer
CFSs	Common Fragile Sites
FHIT	Fragile Histidine Triad Diadenosine Triphosphatase
WWOX	WW Domain Containing Oxidoreductase
PARK2	Parkinson Disease-2
AP-2	Activating Enhancer-Binding Protein 2
TFs	Transcription Factors
G2/3/4	Grade 2/3/4
ECM	Extracellular Matrix
MMP	Matrix Metalloproteinase
CAGE	Cap Analysis Gene Expression
QC	Quality Check
DEGs	Differentially Expressed Genes
CPM	Counts Per Million
logFC	log-Fold-Change
MD	Mean-Difference
PANTHER	Protein Analysis Through Evolutionary Relationships
EMT	Epithelial-to-Mesenchymal Transition
GTRD	Gene Transcription Regulation Database
TRANSFAC	TRANScription FACtor database
TRRUST	Transcriptional Regulatory Relationships Unraveled by Sentence-based Text mining
ITGs	Integrins
MET	Mesenchymal-to-Epithelial Transition
PPxY	Proline-rich
W	Tryptophan
DSMZ	Deutsche Sammlung von Mikroorganismen und Zellkulturen
BrdU	5-bromo-2′-deoxyuridine
RIN	RNA integrity number
BWA	Burrow-Wheeler Aligner
HISAT2	Hierarchical Indexing for Spliced Alignment of Transcripts
IDR	Irreproducible Discovery Rate
TMM	Trimmed Mean of M-values
STRING	Search Tool for the Retrieval of Interacting Genes/Proteins
GEPIA2	Gene Expression Profiling Interactive Analysis 2