Figure 4.
Heat map + protein clusters. The compacted version of the heat map (Permut Matrix 1.9.3) of all 156 protein spot abundances, clustered according to the row Z-score values using Euclidean distance and Ward's minimum criteria, calculated from protein spot abundances. The red values mean higher protein spot abundance in the samples; the green values mean lower protein abundance in the sample according to the variant (DC, Cadeli control; DS, Cadeli stress; VC, Viking control; VS, Viking stress). On the right side, the tiny color marks show nine different clusters, revealing information about the protein accumulation patterns. Clusters: 1, light green, higher in DC; 2, light yellow, higher in DS; 3, red, higher in both DC and DS; 4, green, higher in VC; 5, dark yellow, higher in VS; 6, blue, higher in both VC and VS; 7, black, higher in both controls; 8, gray, higher in both treated samples; and 9, white, miscellaneous patterns.