Table 1.
List of significantly associated SNPs identified by GWAS showing SNP IDs, chromosomes, positions, –log10 (p) values, minor-allele-frequency (MAF) values, marker R2 values, and candidate gene.
| SNP | Chr | Position (V4) | –log10(p) Value | MAF | R2 | Candidate Gene |
|---|---|---|---|---|---|---|
| AX-91593662 | 3 | 218,476,619 | 7.99 | 0.33 | 0.17 | - |
| AX-91593878 | 3 | 219,463,930 | 7.42 | 0.31 | 0.16 | - |
| AX-91849634 | 3 | 22,005,7126 | 13.81 | 0.33 | 0.18 | Zm00001d044129 (Shrunken2) |
| AX-90850969 | 3 | 220,099,694 | 9.74 | 0.34 | 0.17 | - |
| AX-90866628 | 4 | 42,950,506 | 8.1 | 0.48 | 0.16 | - |
| AX-90877243 | 4 | 83,464,190 | 7.5 | 0.05 | 0.11 | - |
| AX-91612113 | 4 | 83,465,341 | 8.37 | 0.05 | 0.16 | - |
| AX-91346854 | 4 | 83,501,441 | 7.37 | 0.07 | 0.11 | - |
| AX-91617781 | 4 | 115,510,176 | 7.46 | 0.05 | 0.17 | - |
| AX-90975122 | 5 | 213,164,020 | 7.26 | 0.07 | 0.10 | - |
| AX-91411958 | 7 | 159,043,703 | 7.34 | 0.09 | 0.09 | - |
| AX-91740905 | 7 | 159,053,605 | 7.34 | 0.09 | 0.11 | - |