Table 1.
Effect of selected viral variations on RBD stability and ACE2 binding.
Viral variation | ΔΔG | RBD Stability | ACE2-RBD Binding energy (kcal/mol) | ACE2 binding affinity |
---|---|---|---|---|
N501Y | 0.53 | Increased | −67.86 | High |
Y453F | −0.5 | Reduced | −60.9 | High |
G446D | −4.12 | Reduced | −55.95 | Low |
G446V | −2.64 | Reduced | −60.16 | High |
L455F | −0.09 | Reduced | −61.61 | High |
A475V | −0.12 | Reduced | −61.19 | High |
K417N | −1.34 | Reduced | −51.25 | High |
F486I | 0.31 | Increased | −58.55 | Low |
F486L | 0.38 | Increased | −58.09 | Low |
N501S | 0.17 | Increased | −61.04 | High |
N501I | 0.8 | Increased | −61.69 | High |
N501T | −0.01 | Reduced | −62.15 | High |
Y505C | −0.06 | Reduced | −52.76 | Low |
Q493L | 0.66 | Increased | −60.06 | High |
Q493K | −0.04 | Reduced | −56.58 | Low |
G446S | −4.11 | Reduced | −60.21 | High |
T500S | −0.15 | Reduced | −55.72 | Low |
Y505H | 0.09 | Increased | −57.21 | Low |
K417R | 0.3 | Increased | −62.04 | High |
Y495F | −0.12 | Reduced | −59.86 | High |
Y449F | 0.02 | Increased | −55.3 | Low |
F456L | −0.2 | Reduced | −57.33 | Low |
F456Y | 0.26 | Increased | −59.55 | Low |
Y489H | −0.78 | Reduced | −57.04 | Low |
Q493H | 0.29 | Increased | −60.28 | high |