Table 1.
Detailed information on 55 PeLBD genes of moso bamboo and their encoded proteins
| Gene Name | Gene ID | Type | Chromosome location | Size (aa) | MW (kDa) | pI | Stability | A.I. | GRAVY | Predicted Location |
|---|---|---|---|---|---|---|---|---|---|---|
| PeLBD01 | PH02Gene35317.t1 | Id | S3:569260–570,698 | 251 | 28.00 | 5.97 | U | 55.7 | −0.537 | Nucleus |
| PeLBD02 | PH02Gene25030.t1 | IIb | S4:11477296–11,478,570 | 224 | 23.10 | 8.10 | U | 78.88 | 0.115 | Nucleus |
| PeLBD03 | PH02Gene22099.t1 | Id | S5:2535208–2,537,046 | 210 | 23.04 | 6.89 | U | 71.62 | −0.346 | Nucleus |
| PeLBD04 | PH02Gene50302.t1 | Ia | S6:43558391–43,560,298 | 229 | 24.37 | 8.45 | U | 73.14 | −0.208 | Nucleus |
| PeLBD05 | PH02Gene44094.t1 | Ia | S7:12271927–12,273,185 | 190 | 20.66 | 6.21 | U | 80.11 | −0.125 | Nucleus |
| PeLBD06 | PH02Gene41745.t1 | Ib | S9:2972347–2,973,626 | 211 | 22.34 | 6.13 | U | 82.51 | 0.056 | Nucleus |
| PeLBD07 | PH02Gene29604.t2 | Ia | S9:7632319–7,634,241 | 237 | 24.61 | 8.83 | U | 79.66 | −0.002 | Nucleus |
| PeLBD08 | PH02Gene42286.t1 | Ia | S9:28982937–28,983,619 | 192 | 20.83 | 6.21 | U | 76.77 | −0.174 | Nucleus |
| PeLBD09 | PH02Gene50136.t1 | Ia | S9:40064587–40,068,578 | 265 | 27.26 | 8.22 | S | 66.75 | −0.106 | Nucleus |
| PeLBD10 | PH02Gene30227.t1 | IIa | S9:65163124–65,165,411 | 306 | 32.75 | 6.01 | U | 71.57 | −0.42 | Nucleus |
| PeLBD11 | PH02Gene13066.t1 | IIb | S10:8461781–8,463,035 | 267 | 28.41 | 7.53 | U | 81.87 | 0.02 | Nucleus |
| PeLBD12 | PH02Gene18918.t1 | Ia | S11:875697–876,960 | 192 | 20.96 | 7.03 | U | 72.81 | −0.31 | Nucleus |
| PeLBD13 | PH02Gene49654.t1 | Ia | S12:880379–881,049 | 95 | 10.26 | 9.07 | U | 63.79 | −0.08 | Nucleus |
| PeLBD14 | PH02Gene39836.t1 | Ie | S12:50000380–50,001,379 | 236 | 26.40 | 5.49 | U | 70.81 | −0.556 | Nucleus |
| PeLBD15 | PH02Gene47164.t1 | Ia | S13:938790–939,778 | 187 | 20.64 | 7.65 | U | 77.33 | −0.222 | Nucleus |
| PeLBD16 | PH02Gene23308.t1 | Id | S13:43857925–43,859,085 | 226 | 24.93 | 5.33 | U | 57.04 | −0.371 | Nucleus |
| PeLBD17 | PH02Gene15982.t1 | Ic | S13:51796126–51,796,722 | 132 | 14.55 | 8.56 | U | 79.32 | −0.152 | Nucleus |
| PeLBD18 | PH02Gene44004.t1 | Ie | S13:97805306–97,807,157 | 347 | 37.32 | 4.86 | U | 71.53 | −0.469 | Nucleus |
| PeLBD19 | PH02Gene32403.t1 | Id | S13:103162261–103,165,624 | 211 | 22.94 | 7.08 | U | 77.35 | −0.303 | Nucleus |
| PeLBD20 | PH02Gene22644.t1 | IIa | S14:24538910–24,542,091 | 493 | 52.67 | 7.86 | U | 77.32 | −0.363 | Nucleus |
| PeLBD21 | PH02Gene22183.t1 | Ie | S14:33873927–33,875,581 | 194 | 21.21 | 6.34 | U | 58.61 | −0.445 | Nucleus |
| PeLBD22 | PH02Gene12829.t1 | Id | S14:60975289–60,976,389 | 220 | 23.52 | 8.20 | U | 83 | −0.091 | Nucleus |
| PeLBD23 | PH02Gene03666.t1 | Ia | S14:67423344–67,424,785 | 243 | 25.49 | 5.70 | U | 79.3 | −0.077 | Nucleus |
| PeLBD24 | PH02Gene07923.t1 | Ia | S14:76595025–76,598,346 | 255 | 26.45 | 8.21 | S | 73.96 | −0.056 | Nucleus |
| PeLBD25 | PH02Gene06893.t1 | Ie | S14:87968952–87,970,940 | 226 | 24.08 | 9.44 | U | 70.13 | −0.326 | Nucleus |
| PeLBD26 | PH02Gene49769.t1 | Ia | S14:99090637–99,093,273 | 244 | 25.26 | 8.47 | U | 73.69 | −0.045 | Nucleus |
| PeLBD27 | PH02Gene20213.t1 | IIa | S14:103753377–103,754,627 | 291 | 31.57 | 6.50 | U | 83.81 | −0.298 | Nucleus |
| PeLBD28 | PH02Gene10461.t1 | IIb | S15:14408150–14,410,891 | 223 | 23.13 | 7.55 | U | 78.03 | −0.062 | Nucleus |
| PeLBD29 | PH02Gene25718.t1 | IIb | S15:26506527–26,507,870 | 202 | 20.94 | 8.81 | U | 80.3 | 0.039 | Nucleus |
| PeLBD30 | PH02Gene00094.t1 | Ib | S15:52345901–52,347,007 | 210 | 22.67 | 6.28 | U | 76.81 | −0.285 | Nucleus |
| PeLBD31 | PH02Gene14134.t1 | Id | S15:57752542–57,754,961 | 245 | 25.43 | 8.25 | U | 75.84 | −0.189 | Nucleus |
| PeLBD32 | PH02Gene03608.t1 | Id | S15:73887001–73,888,432 | 235 | 24.82 | 5.58 | U | 65.45 | −0.14 | Nucleus |
| PeLBD33 | PH02Gene03609.t1 | Id | S15:73891484–73,892,368 | 176 | 18.60 | 5.88 | U | 62.39 | −0.169 | Nucleus |
| PeLBD34 | PH02Gene19411.t1 | Ia | S15:77109714–77,112,202 | 190 | 20.39 | 8.85 | U | 71.42 | −0.275 | Nucleus |
| PeLBD35 | PH02Gene10736.t1 | Ia | S16:12222747–12,226,587 | 253 | 26.33 | 7.61 | S | 78.02 | −0.036 | Chloroplast, Nucleus |
| PeLBD36 | PH02Gene17288.t1 | Ia | S16:22162402–22,163,857 | 240 | 25.23 | 5.91 | U | 77.04 | −0.115 | Nucleus |
| PeLBD37 | PH02Gene00718.t1 | Id | S16:30110878–30,114,440 | 277 | 29.62 | 8.94 | U | 92.67 | 0.017 | Nucleus |
| PeLBD38 | PH02Gene37745.t1 | IIa | S16:78665848–78,666,786 | 193 | 20.80 | 4.96 | U | 87.46 | −0.161 | Nucleus |
| PeLBD39 | PH02Gene15546.t1 | Ia | S16:114628136–114,630,170 | 245 | 25.29 | 6.94 | U | 78.16 | 0.016 | Nucleus |
| PeLBD40 | PH02Gene04162.t1 | IIa | S16:118919168–118,920,519 | 281 | 30.30 | 6.18 | U | 82.31 | −0.272 | Nucleus |
| PeLBD41 | PH02Gene16270.t1 | Id | S17:1406541–1,409,381 | 256 | 28.21 | 5.97 | U | 88.05 | −0.155 | Nucleus |
| PeLBD42 | PH02Gene04387.t1 | Ib | S18:2408520–2,410,099 | 208 | 22.07 | 5.83 | U | 88.37 | 0.082 | Nucleus |
| PeLBD43 | PH02Gene40936.t1 | Ia | S18:7045761–7,047,688 | 238 | 24.80 | 8.83 | U | 77.73 | −0.01 | Nucleus |
| PeLBD44 | PH02Gene44534.t1 | Ib | S19:29729602–29,731,436 | 258 | 28.10 | 8.26 | U | 75.74 | −0.214 | Nucleus |
| PeLBD45 | PH02Gene06695.t1 | Ic | S21:9838964–9,839,798 | 150 | 16.56 | 9.32 | U | 63.33 | −0.527 | Nucleus |
| PeLBD46 | PH02Gene28345.t1 | Ia | S21:31837259–31,840,382 | 193 | 20.54 | 9.04 | U | 75.39 | −0.236 | Nucleus |
| PeLBD47 | PH02Gene26300.t1 | Ia | S21:39362544–39,363,368 | 234 | 24.88 | 6.65 | U | 74.02 | −0.246 | Nucleus |
| PeLBD48 | PH02Gene36754.t2 | IIb | S21:39969712–39,971,881 | 221 | 22.92 | 8.10 | U | 85.34 | 0.037 | Nucleus |
| PeLBD49 | PH02Gene27319.t1 | IIb | S21:50445998–50,447,235 | 200 | 20.62 | 8.42 | U | 81.55 | 0.027 | Nucleus |
| PeLBD50 | PH02Gene18619.t1 | Ib | S21:83920941–83,922,562 | 212 | 22.59 | 6.18 | U | 81.13 | −0.157 | Nucleus |
| PeLBD51 | PH02Gene11011.t1 | Id | S21:107271840–107,272,932 | 270 | 28.75 | 6.03 | U | 69.22 | −0.264 | Nucleus |
| PeLBD52 | PH02Gene11012.t1 | Id | S21:107279627–107,280,827 | 176 | 18.50 | 5.64 | U | 62.39 | −0.172 | Nucleus |
| PeLBD53 | PH02Gene43128.t1 | Id | S22:638099–639,560 | 215 | 23.89 | 6.11 | U | 60.42 | −0.385 | Nucleus |
| PeLBD54 | PH02Gene07094.t1 | Ic | S22:6994313–6,994,963 | 167 | 18.43 | 6.36 | U | 70.3 | −0.422 | Nucleus |
| PeLBD55 | PH02Gene26797.t1 | Ie | S22:25560136–25,561,251 | 315 | 35.19 | 4.78 | U | 69.14 | −0.685 | Nucleus |
MW molecular weight, pI isoelectric point, A.I aliphatic index, GRAVY grand average of hydropathicity score