Skip to main content
. 2021 Jun 30;114:105131. doi: 10.1016/j.bioorg.2021.105131

Table 7.

Molecular modeling results due to docking of compounds (6a–c, 10a–c) and Sunitinib in the PDB ID: 4AGD and 3G0E responsible for VEGFR-2 and c-kit inhibitors, respectively.

Entry Compd. PDB ID: 4AGD
PDB ID: 3G0E
Docking scorea Docking observations Docking scorea Docking observations
1 6a −31.48 H-bond: indolyl CO - CYS919; π-σ interactions: indole - VAL848 −50.99 H-bond: indolyl CO - CYS673, indolyl NH - GLU671, sulfonyl SO-ASP677; π-σ interactions: indole–VAL603
2 6b −40.07 H-bond: indolyl CO - CYS919, indolyl NH - GLU917 −50.69 H-bond: indolyl CO - CYS673, indolyl NH - GLU671; π-σ interactions: indole–VAL603
3 6c −35.67 H-bond: indolyl CO - CYS919 −56.56 H-bond: indolyl CO - CYS673, indolyl NH - GLU671; π-σ interactions: indole–VAL603, phenyl-LEU595
4 10a −34.67 H-bond: indolyl CO - CYS919, indolyl NH - GLU917 −57.88 H-bond: indolyl CO - CYS673, indolyl NH - GLU671, sulfonamide SO-ASP677; π-σ interactions: indole–VAL603
5 10b −39.46 H-bond: indolyl CO - CYS919, indolyl NH - GLU917 −55.81 H-bond: indolyl CO - CYS673
6 10c –33.29 H-bond: indolyl CO - CYS919, indolyl NH - GLU917 −58.33 H-bond: indolyl CO - CYS673, indolyl NH - GLU671, sulfonamide SO-ASP677
7 Sunitinib −53.64 H-bond: indolyl CO - CYS919, indolyl NH - GLU917 −59.88 H-bond: indolyl CO - CYS673, indolyl NH - GLU671; π-σ interactions: indole–VAL603

a Docking score in kcal mol−1.