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. 2020 Dec 30;18(4):397–414. doi: 10.1016/j.gpb.2020.12.004

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© 2020 The Authors

This is an open access article under the CC BY license (http://creativecommons.org/licenses/by/4.0/).

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The enrichment of GO categories in DEPs belonging to cluster 2 and cluster 4

Based on GO slim terms, the DEPs belonging to cluster 2 (continuously upregulated during illumination) and cluster 4 (dramatically downregulated upon illumination) were assigned to BP, CC, and MF GO categories. Terms that were significantly enriched in all DEPs and DEPs belonging to cluster 2 and cluster 4 (adjusted FDR ≤ 0.05) are shown. The protein ratio is the ratio of the number of DEPs annotated to a certain GO term (adjusted FDR ≤ 0.05) to the total number of proteins in the B73 maize genome assigned to that term.