Table 2.
Differentially expressed genes of selected enriched KEGG pathways
| Gene | HUVEC R.E. (log2) | HUAEC R.E. (log2) | Fold Change | P-val | FDR P-val | KEGG pathway |
|---|---|---|---|---|---|---|
| AKT3 | 5.08 | 6.37 | −2.45 | 0.0026 | 0.0362 | a, b, c, d |
| COL1A1 | 4.15 | 5.35 | −2.30 | 0.0039 | 0.0442 | a, b |
| COL1A2 | 5.05 | 8.87 | −14.11 | 4.15E-5 | 0.0030 | a, b |
| COL4A1 | 10.30 | 12.04 | −3.35 | 0.0002 | 0.0073 | a |
| COL4A2 | 11.93 | 13.26 | −2.52 | 5.91E-6 | 0.0002 | a |
| EDN1 | 7.20 | 8.25 | −2.07 | 0.0006 | 0.0165 | c, d |
| FLT1 | 8.85 | 9.6 | −1.68 | 0.0017 | 0.0283 | a, c |
| FLT4 | 6.80 | 5.93 | 1.82 | 0.0032 | 0.0403 | a |
| GNAQ | 8.96 | 9.56 | −1.52 | 0.0002 | 0.0079 | b |
| GNAS | 6.67 | 7.5 | −1.78 | 0.0018 | 0.0292 | b |
| HMOX1 | 10.22 | 7.61 | 6.07 | 1.78E-7 | 6.33E-5 | c, d |
| HRAS | 9.63 | 8.71 | 1.88 | 0.0003 | 0.0113 | a |
| IL6R | 4.96 | 4.34 | 1.54 | 0.0009 | 0.0199 | d |
| ITGA1 | 5.00 | 5.70 | −1.63 | 1.39E-5 | 0.0015 | a |
| ITGA3 | 7.52 | 8.53 | −2.02 | 8.76E-5 | 0.0049 | a |
| ITGA4 | 5.49 | 7.30 | −3.50 | 0.0002 | 0.0093 | a |
| ITGAV | 11.71 | 12.74 | −2.05 | 7.43E-7 | 0.0002 | a, c |
| ITGB3 | 6.12 | 5.31 | 1.76 | 0.0029 | 0.0382 | a, b, c |
| ITPR1 | 6.91 | 7.51 | −1.52 | 0.0031 | 0.0393 | b |
| LAMA2 | 5.44 | 6.84 | −2.64 | 3.13E-8 | 1.63E-5 | a |
| MAP2K6 | 7.37 | 6.53 | 1.79 | 4.90E-6 | 0.0007 | c |
| MAP3K5 | 7.27 | 8.45 | −2.26 | 0.0006 | 0.0167 | c |
| MEF2A | 8.42 | 9.35 | −1.90 | 0.0024 | 0.0344 | c |
| MKNK1 | 5.82 | 6.78 | −1.94 | 0.0009 | 0.0205 | d |
| PDGFA | 9.01 | 9.94 | −1.90 | 4.10E-6 | 0.0006 | a, c |
| PDGFC | 9.19 | 10.83 | −3.11 | 6.67E-6 | 0.0009 | a |
| PIK3CA | 6.08 | 6.92 | −1.79 | 0.0004 | 0.0130 | a, b, c, d |
| PIK3CB | 8.08 | 8.73 | −1.56 | 0.0003 | 0.0115 | a, b, c, d |
| PPP1CA | 10.9 | 10.21 | 1.64 | 0.0012 | 0.0236 | a, b |
| PPP1R12A | 9.72 | 10.34 | −1.54 | 7.25E-5 | 0.0043 | a, b |
| PRKAA1 | 7.02 | 7.75 | −1.66 | 5.40E-6 | 0.0008 | c |
| PRKCA | 4.96 | 4.25 | 1.64 | 0.0031 | 0.0396 | a, d |
| PRKCI | 8.04 | 8.88 | −1.79 | 0.0003 | 0.0100 | b |
| PRKG1 | 5.49 | 6.38 | −1.85 | 0.0034 | 0.0412 | b |
| RELN | 5.72 | 7.02 | −2.46 | 0.0004 | 0.0122 | a |
| SDC1 | 6.95 | 6.06 | 1.85 | 4.30E-5 | 0.0031 | c |
| SNAP23 | 5.60 | 6.43 | −1.79 | 0.0020 | 0.0306 | b |
| SOS2 | 8.66 | 9.37 | −1.63 | 0.0010 | 0.0213 | a |
| THBS1 | 10.68 | 11.63 | −1.93 | 0.0010 | 0.0215 | a |
| VCAM1 | 5.14 | 9.33 | −18.23 | 4.71E-7 | 0.0001 | c |
Lower case letters indicate (a) focal adhesion. (b) platelet activation. (c) fluid shear stress and atherosclerosis and, (d) HIF-1 signaling, from enriched KEGG pathways.