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. Author manuscript; available in PMC: 2021 Jun 30.
Published in final edited form as: Gastroenterology. 2021 Feb 25;160(7):2367–2382.e1. doi: 10.1053/j.gastro.2021.02.052

Table 2.

Selected Patients from Cohort. Peptide concentrations are given in pmol/L. The diagnostic cutoff for ATP7B 1056 is 80.8 pmol/L. The diagnostic cutoff for ATP7B 887 is 114.0 pmol/L.

Patient Gender Age Variant1 Annotation 1 Variant2 Annotation 2 ATP7B 1056 (pmol/L) ATP7B 887 pmol/L CPL (mg/dl) Leipzig Score Liver Copper (ug/g Tissue) KF Ring Presentation
False Negative (n=17)
110 F 17 p.G710A Path p.G710S Path 88.9 133.0 14 7 - N -
10 M 34 p.G710S Path p.G710S Path 120.4 155.3 <9 8 - Y N
11 M 17 p.G710S Path p.G710S Path 193.2 264.3 12 10 - Y B*
12 F 44* p.G710S Path p.G710S Path 151.1 193.6 9.1 11 164 Y N
13 M 19 p.G710S Path p.G710S Path 252.4 381.7 20.7 8 1243 Y B
111 M 47 p.M665I Conflicting p.G710S Path 133.9 213.0 15.5 7 324 N H
112 M NA p.M665I Conflicting p.G710S Path 94.9 144.4 NA 6 324 N H
140 F 29 p.R616Q Path p.L1305P Path 105.5 151.7 2 8 - Y B
149 F 17 p.H1069Q Path p.M769V Likely Path 130.2 180.1 10 8 2047 N H
150 F 31 p.N41S /p.I1021V Likely Path p.M996T Likely Path 129.1 218.6 4 6 >250 N H
153 F 37 p.H1069Q Path p.P1273L Path 105.3 188.5 8 10 - Y N
154 F 18 p.M769H-fs Path p.P1273L Path 121.4 170.4 5 10 - Y N
170 M NA p.H1069Q Path p.R969Q Path 90.5 131.4 NA 4 - - -
124 M 17 p.Q7D-fs*14 VUS p.H1069Q Path 135.8 242.5 19 5 - N H
171 F 9 p.H1069Q Path p.R969Q Path 145.6 220.9 16 5 - N H
176 M NA p.R616W Path p.R969Q Path 134.2 134.2 25 7 - N H
183 F 31 p.T977M Path p.T991A VUS 137.9 191.7 12 3 - Y H

Patients with One Pathogenic/Likely Pathogenic variant in Combination with one VUS (n=37)
124 M 17 p.H1069Q Path p.Q7D-fs*14 VUS 135.8 242.5 19 5 - N H
125 M 9 p.H1069Q Path p.Q7D-fs*14 VUS 79.4 176.3 16 5 - N H
131 F 13 p.H1069Q Path p.I1007T-fs VUS ND 5.4 14 5 - Y H
55 M 59 p.H1069Q Path arr[GRCh37] 13q14.3(52541594_52548863)x1 VUS ND 16.1 13 5 - Y H
87 F 19 p.H1069Q Path p.D1447G-fs VUS 67.5 130.7 13 6 - N H
159 M 40 p.R827W Likely Path p.R1320T VUS 58.7 93.4 13 7 - N N
133 M 18 p.H1069Q Path p.K1028S-fs VUS ND 3.9 12 7 842 N H*
183 F 31 p.T977M Path p.T991A VUS 137.9 191.7 12 3 - Y H
164 F NA p.H1069Q Path p.R778P VUS ND ND 11 9 1332 N H
118 M 6 p.H1069Q Path p.G1011X VUS ND 10.0 10 6 - N H
157 F 8 p.R1041W Likely Path p.D765Y VUS 6.8 20.7 10 8 1211 N H
163 M 2 months p.R778L Path p.V1106I VUS 4.0 9.7 10 - - N A
182 M 40 p.T850I Likely Path p.G515S VUS 11.6 13.4 10 6 - Y B
67 F 17 c.2865+1G>A Path p.Ser135* VUS ND ND <13 9 - N H
167 F 19 p.H1069Q Path p.R919L VUS 3.6 22.1 9 10 - Y N
95 M 53 p.H1069Q Path p.F1343dup VUS ND ND 9 3 - Y H
108 M 15 p.H1069Q Path p.G1341E VUS ND 10.4 6.7 8 - Y H
181 F 41 p.G1266R Path p.T807I VUS 8.3 5.9 6 9 291 N H
193 F 15 p.S1365C-fs*12 Path p.Y743I-fs*19 VUS ND ND <6 7 - N H
80 M 40 p.A874V Path c.2299InsC VUS 6.0 10.5 5.5 10 1575 Y H*
120 F 13 p.H1069Q Path p.Lys269* VUS ND ND 5 5 923 N H
142 M 39 p.T977M Path p.L1350P VUS 22.6 32.6 5 10 - Y B
76 M 5 p.A1018V Path p.E458X VUS 26.4 47.5 4.1 8 793 N H
141 F 46 p.H1069Q Path p.L1333P VUS ND 6.3 4 7 - Y H
184 M 10 p.A874V Path p.V1106I VUS 20.1 15.5 4 - - - -
119 M 38 p.H1069Q Path p.K844E-fs*10 VUS ND 8.7 <4 4 - N N
79 M 59 p.L1088X Likely Path p.A1135Q-fs*13 VUS ND ND <4 6 - Y H
165 M 15 p.R778W Path p.K35N-fs*6 VUS 21.8 25.1 <3 4 - N H
143 F 26 p.R778L Path p.L770L VUS ND ND <3 9 - Y H
69 F 16 p.T1029I Path c.3060+5G>C VUS 2.8 ND <3 8 - Y H
74 F 12 p.H1069Q Path IVS19–1C>G VUS ND 13.5 3 9 - Y N
188 F 8 p.M645R Path p.V997-fs VUS 38.7 72.4 2.4 8 >250 N H*
102 M 9 p.G1341D Path p.F1026F-fs VUS ND ND 2 10 - Y N
134 F 10 p.M769H-fs Path p.K1028S-fs VUS ND ND 2 10 - Y N
72 F 24 p.G710S Path c.3400delC VUS 57.7 96.6 0.6 12 448 Y B
68 M 11 c.1708–1g>c Likely Path c.2866–3c>g VUS 22.4 37.7 NA 6 - Y H
88 F 8 p.M769H-fs Path p.D1460Y VUS 20.3 39.3 low 6 - N H

Patients with Two VUS’s (n=7)
86 F 68 p.E332K VUS p.D1047V VUS 51.7 79.3 27 6 26 N B
3 M 18 p.G1335E VUS p.G1335E VUS ND ND <2 - - Y N
9 F 15 p.G1341E VUS p.G1341E VUS 2.2 ND 1.4 6 - N H
84 M NA p.I1336V VUS p.C709T VUS 10.5 15.5 10 8 552 N H
85 F NA p.I1336V VUS p.C709T VUS ND 6.3 13 7 900 N H
186 M NA p.S932L VUS p.V1364V-fs VUS ND ND 10 9 - N B
130 M 20 p.T59H-fs*19 VUS p.H1247Q VUS 23.6 27.2 <4 9 54 Y N

Patients with Only One Variant Found (No 2nd variant detected) (n=18)
208 M 17 c.2299delC VUS unknown - ND ND <2 - - N H
209 M 19 c.2299delC VUS unknown - ND ND <2 - 502 N N
195 F 43 c.51+4a>t Path unknown - 25.6 37.6 4 8 - Y N
196 F 28 p.A1049A-fs VUS unknown - 2.2 9.1 3 7 - Y N
194 M 50 p.D765N Path unknown - 20.4 21.4 <4 8 - Y N
197 M 22 p.G1176R Path unknown - 3.6 7.3 3 5 - N H
199 M 17 p.H1069Q Path unknown - 8.6 32.9 <10 5 - N N
201 M 14 p.H1069Q Path unknown - 31.4 29.0 3.4 - - N N
198 F NA p.H1069Q Path unknown - ND 5.0 12 6 - N H
200 M 14 p.H1069Q Path unknown - ND 6.7 13 4 - Y H
211 F 22 p.H1069Q Path unknown - ND 7.9 2 5 - N N
210 M NA p.L1305P Path unknown - ND 6.0 NA 3 - - -
202 F 16 p.M769H-fs Path unknown - ND ND 13.8 6 525 Y H
203 M 37 p.R1319X Path unknown - 3.0 5.2 <10 9 1042 Y B
204 M 12 p.R778L Path unknown - ND 9.5 <3.0 5 - N H
205 M 25 p.T1220M Likely Path unknown - 67.7 77.0 <10 4 191 N B
207 F 18 p.W779X Path unknown - 38.0 65.6 15.3 6 258 N H
206 M 45 p.W779X Path unknown - ND ND <^4 6 - Y H

KF ring: Y=Present, N=Not present

Presentation: H=Hepatic, N=Neurologic, A=Asymptomatic, B=Both Hepatic and Neurologic,

*

=Cirrhosis