(A-E) Assessment of the outcome of SIV infection after
repeated, limiting dose SIVmac239 challenge (see Fig. 6A) of the designated vaccine groups by
longitudinal analysis of plasma viral load (left panels) and de
novo development of SIVvif-specific CD4+ (middle panels)
and CD8+ (right panels) T cell responses. RMs were challenged until
the onset of any sustained above-threshold SIVvif-specific T cell response, with
the SIV dose administered 2 or 3 weeks prior to the initial response detection
considered the infecting challenge (week 0). The n in each panel reflects the
total number of RMs with such documented take of SIV infection during the
challenge period. RMs with sustained viremia were considered non-protected
(black); RMs with no or transient viremia but demonstrating sustained
above-threshold SIVvif-specific T cell responses were considered protected (red)
(6–8). Binomial exact p-values are shown where the
proportion of protected RMs in a vaccine group differs significantly from the
unvaccinated group. (F) Bone marrow (BM), peripheral lymph node
(LN) and peripheral blood mononuclear cell (PBMC) samples from all
vaccine-protected RMs (red) and 2 non-protected RMs (black) for comparison (left
panel), collected from between day 28 and 56 post-SIV infection, were analyzed
by nested, quantitative PCR/RT-PCR for cell-associated SIV DNA and RNA. The
dotted line indicates the threshold of detection (B.T. = below threshold) with
data points below this line reflecting no positive reactions across all
replicates.