Table 1.
Locus* | Protein | Gene position and nucleotide difference relative to TPeC Cuniculi A | Number of SNVs/total gene length [nt] | Protein position and amino acid difference relative to TPeC Cuniculi A |
---|---|---|---|---|
TP0500 | Pbp-1 | 55 T → C | 2/1875 | 19 F → L |
711 T → C | No change | |||
TP0547 | LytB | No change | 0/1131 | No change |
TP0574 | Carboxypeptidase 47 kDa | No change | 0/1305 | No change |
TP0705 | Pbp-2 | 1,628 A → G | 1/2655 | 543 H → R** |
TP0760 | Pbp-3 | 412 C → T | 3/1866 | 138 R → C |
900 A → G | No change | |||
1,563 G → A | No change |
Altogether, 8,832 bp were determined, covering the entire sequences of these loci.
The amino acid change resulted in a residue that is present among TPA strains.
The determined sequences were compared to those found in TPeC Cuniculi A.