Table 1. The datasets characteristic of nine microarray chips.
GEO accession | Platform of dataset | Region | Submission year | Type of platform | Sample | All miRNAs | DEMs | References |
---|---|---|---|---|---|---|---|---|
GSE23739 | GPL7731 | Switzerland | 2011 | Agilent-019118 Human miRNA Microarray 2.0 G4470B | 40 paired of GC vs. GNT | 720 | 122 | Oh HK |
GSE26595 | GPL8179 | South Korea | 2011 | Illumina Human v2 MicroRNA expression beadchip | 60 paired of GC vs. GNT | 360 | 5 | Lim JY |
GSE26645 | GPL11487 | China | 2011 | Agilent-021827 Human miRNA Microarray | 4 paired of GC vs. ANT | 851 | 3 | – |
GSE28700 | GPL9081 | Taiwan | 2011 | Agilent-016436 Human miRNA Microarray 1.0 G4472A | 22 paired of GC vs. GNT | 470 | 25 | – |
GSE33743 | GPL14895 | Portugal | 2011 | miRNAChip_human_V2 | 37 primary GC vs. 10 GNT | 703 | 7 | Carvalho J |
GSE54397 | GPL15159 | South Korea | 2014 | Agilent-031181 Unrestricted_Human_miRNA_V16.0_Microarray 030840 | 16 paired of GC vs. GNT | 1205 | 50 | Chang H |
GSE63121 | GPL8786 | China | 2014 | Affymetrix Multispecies miRNA-1 Array | 15 paired of GC vs. GNT | 848 | 24 | Zhang X |
GSE78091 | GPL21439 | China | 2016 | miRCURY LNA microRNA Array, 7th generation - hsa, mmu & rno | 3 paired of GC vs. GNT | 1,921 | 385 | – |
GSE93415 | GPL19071 | Poland | 2017 | Exiqon miRCURY LNA microRNA array; 7th generation REV - hsa, mmu & rno; batch 208520-22; lot 35101-35101 | 20 paired of GC vs. ANT | 891 | 107 | – |
GEO, Gene Expression Omnibus; DEMs, differentially expressed miRNAs; GC, gastric cancer; GNT, gastric normal tissue; ANT, adjacent normal tissue; LNA, Locked Nucleic Acid; REV, Revision.