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. 2020 Nov 20;21(4):1008–1020. doi: 10.1111/1755-0998.13284

TABLE 1.

Vaquita genome assembly metrics. Genome size is the kmer estimate based on GenomeScope (version 1.0) analysis of the 10X Genomics data with k = 31. The BUSCO score is for complete genes identified from the mammalian single‐copy conserved gene data set

Genome quality metric
Contig N50 20.22 Mb
Scaffold N50 (max size) 115.47 Mb (185.85 Mb)
No. scaffolds (primary haplotype) 64
Base quality (QV) 40.9
Genes identified (BUSCO) 91.6%
Assembly size (ungapped) 2,363,494,880 bp
Assembly size (total) 2,371,540,524 bp
Genome size 2,667,451,016 bp