TABLE 1.
Vaquita genome assembly metrics. Genome size is the kmer estimate based on GenomeScope (version 1.0) analysis of the 10X Genomics data with k = 31. The BUSCO score is for complete genes identified from the mammalian single‐copy conserved gene data set
Genome quality metric | |
---|---|
Contig N50 | 20.22 Mb |
Scaffold N50 (max size) | 115.47 Mb (185.85 Mb) |
No. scaffolds (primary haplotype) | 64 |
Base quality (QV) | 40.9 |
Genes identified (BUSCO) | 91.6% |
Assembly size (ungapped) | 2,363,494,880 bp |
Assembly size (total) | 2,371,540,524 bp |
Genome size | 2,667,451,016 bp |