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. 2021 Jun 17;12:642012. doi: 10.3389/fgene.2021.642012

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Copyright © 2021 Hertzman, Deshpande, Leary, Li, Ram, Chopra, Cooper, Watson, Palubinsky, Mallal, Gibson and Phillips.

This is an open-access article distributed under the terms of the Creative Commons Attribution License (CC BY). The use, distribution or reproduction in other forums is permitted, provided the original author(s) and the copyright owner(s) are credited and that the original publication in this journal is cited, in accordance with accepted academic practice. No use, distribution or reproduction is permitted which does not comply with these terms.

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Tools to visualize differential gene expression. (A) Volcano plot for differential expression analysis between two groupings/samples. User-defined thresholds can be set for fold change and significance, visualized according to color (red and green represent genes above different preselected fold change (FC) and significance (p-value). Right-click menu provides options for addition and formatting of gene labels, plot coloring, and exclusion of selected genes. (B) RNASeqHEAT enables generation of a heatmap of selected genes as shown on horizontal axis and with selected samples on vertical axis. Option panel (highlighted in red) allows customization.