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. 2021 Feb 11;186(1):16–27. doi: 10.1002/ajmg.b.32834

TABLE 5.

Best three signals for each PGC dataset

Trait rs_id chr bp P pval Info MAF Genes/Distance (Kbp)
ADHD rs568113293 11 54,899,533 7.40 * 10−16 0.0189 0.00049

TRIM48,130.125

RP11‐72 M10.2,135.351

rs544637819 3 15,310,737 1.78 * 10−14 0.1543 0.00171

SH3BP5, 0

SH3BP5‐AS1, 4.737

chr6:30450452 6 30,450,452 6.44 * 10−13 0.0698 0.00151

RANP1, 3.265

HLA‐E, 6.792

AUT rs138098629 22 36,584,165 8.01 * 10−15 0.4980 0.00063

APOL4, 1.007

MTND1P10, 8.732
BIP rs76350051 7 64,164,245 2.42 * 10−37 0.0417 0.00046

ZNF107, 0

RP11‐561 N12.7, 16.474

rs138549126 3 52,592,843 6.65 * 10−16 0.073 0.00052

SMIM4, 0

PBRM1, 0

rs149257260 15 71,600,045 1.40 * 10−15 0.4246 0.00017

THSD4, 0

RP11‐592 N21.1, 33.421

ED rs78958069 8 43,539,021 4.17 * 10−10 0.005 0.0002

RP11‐643 N23.2, 10.803

AC134698.1, 123.105
rs144485994 20 4,963,320 5.18 * 10−9 0.15 0.0001

SLC23A2, 0

RP5‐1116H23.1, 30.846
MDD rs567868887 12 31,931,432 1.57 * 10−55 0.2800 0.00098

H3F3C, 12.691

RP11‐467 L13.5, 23.377

rs112241719 11 111,514,969 8.14 * 10−45 0.4900 0.00025

SIK2, 0

AP000925.2, 26.711

rs182264017 1 188,992,506 5.05 * 10−44 0.2775 0.00035

LINC01035, 0

CLPTM1LP1, 12.586

PTSD rs150642422 1 89,223,553 1.3 * 10−43 0.5512 0.0002

PKN2, 0

RNU6‐125P, 58.909

rs7521099 1 88,875,371 1.4 * 10−15 0.4521 0.0002 GBP3, 248.796
rs111229512 2 31,800,662 6.7 * 10−14 0.6325 0.0002

BP7, 373.881

GBP4, 423.278

PTSD‐AA rs111819353 7

127,907,569

1.1 * 10−17 0.312 0.001

LEP, 9.8

RBM28,

rs370549636 20 58,131,312 7.2 * 10−15 0.37 0.001

PHACTR3, 21.252

PIEZO1P1,95.42

rs554371692

 13 20,632,168 3.2 * 10−12 0.21 0.001

ZMYM2, 0

KRR1P1, 21.222
SCZ rs559199817 3 17,267,731 1.30 * 10−87 0.0213 0.00073

TBC1D5, 0

AC090644.1, 90.517

rs143337489 12 11,2089,686 9.26 * 10−46 0.2464 0.00019

BRAP, 0

PCNPP1, 17.97

rs193224736 16 8,593,132 3.79 * 10−21 0.28476 0.00018

RP11‐483 K5.3, 11.117

TMEM114, 26.37

Abbreviations: ADHD, attention deficit hyperactive disorder; AUT, autism; BIP, bipolar; ED, eating disorder; MAF, minor‐AF; MDD, major depressive disorder; PTSD, post‐traumatic stress disorder; PTSD‐AA, Africanpost‐traumatic stress disorder; SCZ, schizophrenia.

Note: Bolded and underlined entries correspond to the most stringent threshold of p < 3 * 10−15, not bolded but underlined to the second most conservative threshold 3 * 10−15 < p < 10−12 and not bolded not underlined 10−12 < p < 5 * 10−8.