Fig. 3.

Scatterplots show the association between highly correlated taxa and overall resistome outcomes across 6-week and 1-year samples. Plots (a) and (b) depict the overall relative abundance of the resistome in RPKM versus the relative abundance of E. coli and Proteobacteria with high correlation. The number of unique antimicrobial resistance genes was most correlated with the relative abundance of E. coli (c) and less correlated with Proteobacteria relative abundance (d). Fig. 3a and c are colored by the relative abundance of Proteobacteria and Fig. 3b and d are colored by the relative abundance of E. coli