Resulting uncertainties; The resulting x-, y-, and in-plane error when comparing landmarks identified in the in-vivo transaxial MRI and the registered histopathology. (A–C) Shows the result before and (D–F) after contour-correcting deformable registration. Each box represents the interquartile range (IQR), i.e., the first and third quartile. The horizontal line in each box defines the median value and the diamond the mean value. The top whisker is calculated by adding 1.5 * IQR to the third quartile, and the bottom whiskers by subtracting 1.5 * IQR from the first quartile. Black points represent data points located outside the end of each whisker.